Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
RNF43Q68DV7 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RNF43Q68DV7 SHD-204ENST00000599689 1729 ntTSL 5 BASIC23.16■■□□□ 1.3
RNF43Q68DV7 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
RNF43Q68DV7 SERBP1P1-201ENST00000396021 1160 ntBASIC23.16■■□□□ 1.3
RNF43Q68DV7 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.16■■□□□ 1.3
RNF43Q68DV7 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
RNF43Q68DV7 MIR6821-201ENST00000617625 74 ntBASIC23.16■■□□□ 1.3
RNF43Q68DV7 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
RNF43Q68DV7 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RNF43Q68DV7 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RNF43Q68DV7 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RNF43Q68DV7 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
RNF43Q68DV7 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
RNF43Q68DV7 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RNF43Q68DV7 GALC-202ENST00000393568 2054 ntTSL 2 BASIC23.15■■□□□ 1.3
RNF43Q68DV7 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RNF43Q68DV7 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC23.15■■□□□ 1.3
RNF43Q68DV7 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RNF43Q68DV7 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RNF43Q68DV7 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
RNF43Q68DV7 GLI3-203ENST00000437480 451 ntTSL 2 BASIC23.15■■□□□ 1.3
RNF43Q68DV7 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
RNF43Q68DV7 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC23.15■■□□□ 1.3
RNF43Q68DV7 SYT6-210ENST00000641643 1587 ntBASIC23.14■■□□□ 1.3
RNF43Q68DV7 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
RNF43Q68DV7 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC23.14■■□□□ 1.29
RNF43Q68DV7 AC011298.3-201ENST00000615796 283 ntBASIC23.14■■□□□ 1.29
RNF43Q68DV7 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RNF43Q68DV7 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RNF43Q68DV7 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RNF43Q68DV7 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RNF43Q68DV7 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RNF43Q68DV7 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RNF43Q68DV7 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
RNF43Q68DV7 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
RNF43Q68DV7 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
RNF43Q68DV7 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RNF43Q68DV7 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RNF43Q68DV7 AC006455.2-201ENST00000429931 906 ntBASIC23.13■■□□□ 1.29
RNF43Q68DV7 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC23.13■■□□□ 1.29
RNF43Q68DV7 AF213884.3-201ENST00000563833 479 ntBASIC23.13■■□□□ 1.29
RNF43Q68DV7 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RNF43Q68DV7 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RNF43Q68DV7 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
RNF43Q68DV7 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC23.13■■□□□ 1.29
RNF43Q68DV7 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RNF43Q68DV7 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RNF43Q68DV7 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RNF43Q68DV7 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RNF43Q68DV7 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
RNF43Q68DV7 PTCHD3P2-201ENST00000424937 1205 ntBASIC23.12■■□□□ 1.29
RNF43Q68DV7 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RNF43Q68DV7 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC23.12■■□□□ 1.29
RNF43Q68DV7 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC23.12■■□□□ 1.29
RNF43Q68DV7 GRAMD4P4-201ENST00000613563 1115 ntBASIC23.12■■□□□ 1.29
RNF43Q68DV7 AL136967.2-201ENST00000623968 743 ntBASIC23.12■■□□□ 1.29
RNF43Q68DV7 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC23.12■■□□□ 1.29
RNF43Q68DV7 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC23.12■■□□□ 1.29
RNF43Q68DV7 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RNF43Q68DV7 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.12■■□□□ 1.29
RNF43Q68DV7 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
RNF43Q68DV7 RBM38-205ENST00000440234 686 ntTSL 2 BASIC23.11■■□□□ 1.29
RNF43Q68DV7 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC23.11■■□□□ 1.29
RNF43Q68DV7 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.11■■□□□ 1.29
RNF43Q68DV7 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RNF43Q68DV7 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
RNF43Q68DV7 AC097381.1-201ENST00000429019 1296 ntBASIC23.1■■□□□ 1.29
RNF43Q68DV7 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.1■■□□□ 1.29
RNF43Q68DV7 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC23.1■■□□□ 1.29
RNF43Q68DV7 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
RNF43Q68DV7 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
RNF43Q68DV7 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC23.1■■□□□ 1.29
RNF43Q68DV7 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RNF43Q68DV7 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC23.1■■□□□ 1.29
RNF43Q68DV7 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RNF43Q68DV7 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
RNF43Q68DV7 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
RNF43Q68DV7 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
RNF43Q68DV7 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
RNF43Q68DV7 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC23.09■■□□□ 1.29
RNF43Q68DV7 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.09■■□□□ 1.29
RNF43Q68DV7 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC23.09■■□□□ 1.29
RNF43Q68DV7 AL162430.1-201ENST00000480705 870 ntBASIC23.09■■□□□ 1.29
RNF43Q68DV7 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC23.09■■□□□ 1.29
RNF43Q68DV7 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RNF43Q68DV7 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
RNF43Q68DV7 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
RNF43Q68DV7 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RNF43Q68DV7 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
RNF43Q68DV7 AC009086.3-201ENST00000623486 1008 ntBASIC23.08■■□□□ 1.29
RNF43Q68DV7 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC23.08■■□□□ 1.29
RNF43Q68DV7 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
RNF43Q68DV7 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RNF43Q68DV7 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RNF43Q68DV7 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
RNF43Q68DV7 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
RNF43Q68DV7 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RNF43Q68DV7 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
RNF43Q68DV7 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.07■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms