Protein–RNA interactions for Protein: Q5T2R2

PDSS1, Decaprenyl-diphosphate synthase subunit 1, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDSS1Q5T2R2 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
PDSS1Q5T2R2 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDSS1Q5T2R2 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDSS1Q5T2R2 SERBP1P1-201ENST00000396021 1160 ntBASIC20.02■□□□□ 0.8
PDSS1Q5T2R2 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.02■□□□□ 0.8
PDSS1Q5T2R2 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.02■□□□□ 0.8
PDSS1Q5T2R2 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.02■□□□□ 0.8
PDSS1Q5T2R2 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDSS1Q5T2R2 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PDSS1Q5T2R2 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
PDSS1Q5T2R2 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDSS1Q5T2R2 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PDSS1Q5T2R2 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDSS1Q5T2R2 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDSS1Q5T2R2 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDSS1Q5T2R2 AC006455.2-201ENST00000429931 906 ntBASIC20.01■□□□□ 0.79
PDSS1Q5T2R2 AC106739.1-201ENST00000617035 715 ntBASIC20.01■□□□□ 0.79
PDSS1Q5T2R2 AC110285.6-201ENST00000617652 491 ntBASIC20.01■□□□□ 0.79
PDSS1Q5T2R2 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDSS1Q5T2R2 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDSS1Q5T2R2 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDSS1Q5T2R2 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDSS1Q5T2R2 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDSS1Q5T2R2 AC068473.5-201ENST00000616428 2072 ntBASIC20.01■□□□□ 0.79
PDSS1Q5T2R2 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
PDSS1Q5T2R2 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
PDSS1Q5T2R2 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20■□□□□ 0.79
PDSS1Q5T2R2 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20■□□□□ 0.79
PDSS1Q5T2R2 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDSS1Q5T2R2 MIR3181-201ENST00000578512 73 ntBASIC20■□□□□ 0.79
PDSS1Q5T2R2 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20■□□□□ 0.79
PDSS1Q5T2R2 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
PDSS1Q5T2R2 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDSS1Q5T2R2 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDSS1Q5T2R2 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDSS1Q5T2R2 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20■□□□□ 0.79
PDSS1Q5T2R2 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDSS1Q5T2R2 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDSS1Q5T2R2 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
PDSS1Q5T2R2 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
PDSS1Q5T2R2 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.99■□□□□ 0.79
PDSS1Q5T2R2 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDSS1Q5T2R2 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.99■□□□□ 0.79
PDSS1Q5T2R2 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.99■□□□□ 0.79
PDSS1Q5T2R2 AC024257.2-201ENST00000549699 147 ntBASIC19.99■□□□□ 0.79
PDSS1Q5T2R2 AC133561.4-201ENST00000566112 224 ntBASIC19.99■□□□□ 0.79
PDSS1Q5T2R2 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
PDSS1Q5T2R2 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDSS1Q5T2R2 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDSS1Q5T2R2 ANOS2P-203ENST00000472227 1816 ntBASIC19.99■□□□□ 0.79
PDSS1Q5T2R2 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDSS1Q5T2R2 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PDSS1Q5T2R2 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
PDSS1Q5T2R2 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDSS1Q5T2R2 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDSS1Q5T2R2 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDSS1Q5T2R2 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDSS1Q5T2R2 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.98■□□□□ 0.79
PDSS1Q5T2R2 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
PDSS1Q5T2R2 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.98■□□□□ 0.79
PDSS1Q5T2R2 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.98■□□□□ 0.79
PDSS1Q5T2R2 AL499627.2-201ENST00000606283 725 ntBASIC19.98■□□□□ 0.79
PDSS1Q5T2R2 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDSS1Q5T2R2 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDSS1Q5T2R2 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
PDSS1Q5T2R2 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDSS1Q5T2R2 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
PDSS1Q5T2R2 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDSS1Q5T2R2 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDSS1Q5T2R2 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.98■□□□□ 0.79
PDSS1Q5T2R2 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDSS1Q5T2R2 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
PDSS1Q5T2R2 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDSS1Q5T2R2 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDSS1Q5T2R2 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
PDSS1Q5T2R2 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDSS1Q5T2R2 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.97■□□□□ 0.79
PDSS1Q5T2R2 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.97■□□□□ 0.79
PDSS1Q5T2R2 AC092068.2-201ENST00000590491 1708 ntBASIC19.97■□□□□ 0.79
PDSS1Q5T2R2 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.97■□□□□ 0.79
PDSS1Q5T2R2 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
PDSS1Q5T2R2 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDSS1Q5T2R2 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.97■□□□□ 0.79
PDSS1Q5T2R2 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDSS1Q5T2R2 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.97■□□□□ 0.79
PDSS1Q5T2R2 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.97■□□□□ 0.79
PDSS1Q5T2R2 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.97■□□□□ 0.79
PDSS1Q5T2R2 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.97■□□□□ 0.79
PDSS1Q5T2R2 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PDSS1Q5T2R2 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
PDSS1Q5T2R2 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDSS1Q5T2R2 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PDSS1Q5T2R2 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.97■□□□□ 0.79
PDSS1Q5T2R2 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.97■□□□□ 0.79
PDSS1Q5T2R2 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.96■□□□□ 0.79
PDSS1Q5T2R2 AL353803.4-201ENST00000565882 1934 ntBASIC19.96■□□□□ 0.79
PDSS1Q5T2R2 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.96■□□□□ 0.79
PDSS1Q5T2R2 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.96■□□□□ 0.79
PDSS1Q5T2R2 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.96■□□□□ 0.79
PDSS1Q5T2R2 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms