Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
LRRK2Q5S007 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC19.55■□□□□ 0.72
LRRK2Q5S007 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRRK2Q5S007 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.55■□□□□ 0.72
LRRK2Q5S007 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
LRRK2Q5S007 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRRK2Q5S007 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
LRRK2Q5S007 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LRRK2Q5S007 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRK2Q5S007 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRK2Q5S007 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.54■□□□□ 0.72
LRRK2Q5S007 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LRRK2Q5S007 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
LRRK2Q5S007 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LRRK2Q5S007 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRRK2Q5S007 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.54■□□□□ 0.72
LRRK2Q5S007 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRK2Q5S007 SLC6A10P-202ENST00000431994 2058 ntBASIC19.53■□□□□ 0.72
LRRK2Q5S007 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
LRRK2Q5S007 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRK2Q5S007 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRK2Q5S007 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRK2Q5S007 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRK2Q5S007 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
LRRK2Q5S007 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.53■□□□□ 0.72
LRRK2Q5S007 AC133552.2-202ENST00000575694 574 ntBASIC19.53■□□□□ 0.72
LRRK2Q5S007 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.53■□□□□ 0.72
LRRK2Q5S007 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRK2Q5S007 UBE2DNL-204ENST00000602536 740 ntBASIC19.53■□□□□ 0.72
LRRK2Q5S007 SHF-208ENST00000560734 1731 ntTSL 3 BASIC19.53■□□□□ 0.72
LRRK2Q5S007 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.53■□□□□ 0.72
LRRK2Q5S007 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRK2Q5S007 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.53■□□□□ 0.72
LRRK2Q5S007 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LRRK2Q5S007 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.53■□□□□ 0.72
LRRK2Q5S007 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.53■□□□□ 0.72
LRRK2Q5S007 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRRK2Q5S007 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
LRRK2Q5S007 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.52■□□□□ 0.72
LRRK2Q5S007 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.52■□□□□ 0.72
LRRK2Q5S007 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.52■□□□□ 0.72
LRRK2Q5S007 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.52■□□□□ 0.71
LRRK2Q5S007 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.52■□□□□ 0.71
LRRK2Q5S007 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.52■□□□□ 0.71
LRRK2Q5S007 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.52■□□□□ 0.71
LRRK2Q5S007 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
LRRK2Q5S007 MIR1224-201ENST00000408193 85 ntBASIC19.51■□□□□ 0.71
LRRK2Q5S007 AC008550.1-201ENST00000511500 884 ntBASIC19.51■□□□□ 0.71
LRRK2Q5S007 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.51■□□□□ 0.71
LRRK2Q5S007 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
LRRK2Q5S007 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRRK2Q5S007 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.51■□□□□ 0.71
LRRK2Q5S007 RPS2P4-201ENST00000476944 856 ntBASIC19.51■□□□□ 0.71
LRRK2Q5S007 AC133041.1-202ENST00000642053 222 ntBASIC19.51■□□□□ 0.71
LRRK2Q5S007 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRRK2Q5S007 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LRRK2Q5S007 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRRK2Q5S007 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRRK2Q5S007 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.5■□□□□ 0.71
LRRK2Q5S007 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
LRRK2Q5S007 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
LRRK2Q5S007 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LRRK2Q5S007 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LRRK2Q5S007 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRRK2Q5S007 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.5■□□□□ 0.71
LRRK2Q5S007 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.5■□□□□ 0.71
LRRK2Q5S007 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LRRK2Q5S007 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.5■□□□□ 0.71
LRRK2Q5S007 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.5■□□□□ 0.71
LRRK2Q5S007 AC231657.2-201ENST00000624556 255 ntBASIC19.5■□□□□ 0.71
LRRK2Q5S007 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.49■□□□□ 0.71
LRRK2Q5S007 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRRK2Q5S007 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRRK2Q5S007 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LRRK2Q5S007 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.49■□□□□ 0.71
LRRK2Q5S007 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LRRK2Q5S007 FAM210CP-201ENST00000445714 574 ntBASIC19.49■□□□□ 0.71
LRRK2Q5S007 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.49■□□□□ 0.71
LRRK2Q5S007 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
LRRK2Q5S007 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRRK2Q5S007 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.49■□□□□ 0.71
LRRK2Q5S007 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
LRRK2Q5S007 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.49■□□□□ 0.71
LRRK2Q5S007 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRK2Q5S007 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LRRK2Q5S007 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRK2Q5S007 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
LRRK2Q5S007 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LRRK2Q5S007 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.48■□□□□ 0.71
LRRK2Q5S007 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.48■□□□□ 0.71
LRRK2Q5S007 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.48■□□□□ 0.71
LRRK2Q5S007 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.48■□□□□ 0.71
LRRK2Q5S007 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRK2Q5S007 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRK2Q5S007 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
LRRK2Q5S007 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRK2Q5S007 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
LRRK2Q5S007 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.48■□□□□ 0.71
LRRK2Q5S007 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LRRK2Q5S007 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms