Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PTPN20Q4JDL3 AL136116.3-201ENST00000402907 1138 ntBASIC23.36■■□□□ 1.33
PTPN20Q4JDL3 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC23.36■■□□□ 1.33
PTPN20Q4JDL3 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PTPN20Q4JDL3 pRNA.6-201ENST00000610482 90 ntBASIC23.36■■□□□ 1.33
PTPN20Q4JDL3 pRNA.5-201ENST00000612139 90 ntBASIC23.36■■□□□ 1.33
PTPN20Q4JDL3 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC23.36■■□□□ 1.33
PTPN20Q4JDL3 pRNA.11-201ENST00000618423 90 ntBASIC23.36■■□□□ 1.33
PTPN20Q4JDL3 pRNA.13-201ENST00000619112 90 ntBASIC23.36■■□□□ 1.33
PTPN20Q4JDL3 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC23.36■■□□□ 1.33
PTPN20Q4JDL3 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PTPN20Q4JDL3 AC004687.1-201ENST00000579003 1625 ntBASIC23.36■■□□□ 1.33
PTPN20Q4JDL3 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
PTPN20Q4JDL3 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC23.36■■□□□ 1.33
PTPN20Q4JDL3 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PTPN20Q4JDL3 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PTPN20Q4JDL3 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PTPN20Q4JDL3 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC23.35■■□□□ 1.33
PTPN20Q4JDL3 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC23.35■■□□□ 1.33
PTPN20Q4JDL3 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC23.35■■□□□ 1.33
PTPN20Q4JDL3 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC23.35■■□□□ 1.33
PTPN20Q4JDL3 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC23.35■■□□□ 1.33
PTPN20Q4JDL3 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PTPN20Q4JDL3 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PTPN20Q4JDL3 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
PTPN20Q4JDL3 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PTPN20Q4JDL3 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC23.35■■□□□ 1.33
PTPN20Q4JDL3 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
PTPN20Q4JDL3 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PTPN20Q4JDL3 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PTPN20Q4JDL3 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PTPN20Q4JDL3 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
PTPN20Q4JDL3 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
PTPN20Q4JDL3 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PTPN20Q4JDL3 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PTPN20Q4JDL3 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
PTPN20Q4JDL3 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC23.34■■□□□ 1.33
PTPN20Q4JDL3 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
PTPN20Q4JDL3 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PTPN20Q4JDL3 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PTPN20Q4JDL3 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
PTPN20Q4JDL3 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
PTPN20Q4JDL3 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
PTPN20Q4JDL3 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PTPN20Q4JDL3 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
PTPN20Q4JDL3 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC23.33■■□□□ 1.33
PTPN20Q4JDL3 MIR3181-201ENST00000578512 73 ntBASIC23.33■■□□□ 1.33
PTPN20Q4JDL3 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
PTPN20Q4JDL3 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC23.33■■□□□ 1.33
PTPN20Q4JDL3 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC23.33■■□□□ 1.32
PTPN20Q4JDL3 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.32
PTPN20Q4JDL3 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
PTPN20Q4JDL3 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC23.32■■□□□ 1.32
PTPN20Q4JDL3 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.32■■□□□ 1.32
PTPN20Q4JDL3 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PTPN20Q4JDL3 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PTPN20Q4JDL3 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
PTPN20Q4JDL3 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PTPN20Q4JDL3 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
PTPN20Q4JDL3 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
PTPN20Q4JDL3 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC23.31■■□□□ 1.32
PTPN20Q4JDL3 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PTPN20Q4JDL3 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
PTPN20Q4JDL3 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PTPN20Q4JDL3 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
PTPN20Q4JDL3 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC23.31■■□□□ 1.32
PTPN20Q4JDL3 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC23.31■■□□□ 1.32
PTPN20Q4JDL3 AC133637.1-201ENST00000624115 1537 ntBASIC23.31■■□□□ 1.32
PTPN20Q4JDL3 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PTPN20Q4JDL3 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PTPN20Q4JDL3 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PTPN20Q4JDL3 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
PTPN20Q4JDL3 TERT-206ENST00000508104 2486 ntTSL 5 BASIC23.31■■□□□ 1.32
PTPN20Q4JDL3 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PTPN20Q4JDL3 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
PTPN20Q4JDL3 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PTPN20Q4JDL3 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PTPN20Q4JDL3 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.3■■□□□ 1.32
PTPN20Q4JDL3 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PTPN20Q4JDL3 SERBP1P1-201ENST00000396021 1160 ntBASIC23.3■■□□□ 1.32
PTPN20Q4JDL3 PTCHD3P2-201ENST00000424937 1205 ntBASIC23.3■■□□□ 1.32
PTPN20Q4JDL3 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PTPN20Q4JDL3 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC23.3■■□□□ 1.32
PTPN20Q4JDL3 AC092171.4-201ENST00000609130 632 ntBASIC23.3■■□□□ 1.32
PTPN20Q4JDL3 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
PTPN20Q4JDL3 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PTPN20Q4JDL3 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PTPN20Q4JDL3 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC23.3■■□□□ 1.32
PTPN20Q4JDL3 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
PTPN20Q4JDL3 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PTPN20Q4JDL3 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23.3■■□□□ 1.32
PTPN20Q4JDL3 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
PTPN20Q4JDL3 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PTPN20Q4JDL3 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PTPN20Q4JDL3 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PTPN20Q4JDL3 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
PTPN20Q4JDL3 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PTPN20Q4JDL3 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
PTPN20Q4JDL3 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC23.29■■□□□ 1.32
PTPN20Q4JDL3 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms