Protein–RNA interactions for Protein: Q495N2

SLC36A3, Proton-coupled amino acid transporter 3, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC36A3Q495N2 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.6■□□□□ 0.89
SLC36A3Q495N2 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC36A3Q495N2 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
SLC36A3Q495N2 DUX4L9-201ENST00000449051 1259 ntBASIC20.6■□□□□ 0.89
SLC36A3Q495N2 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
SLC36A3Q495N2 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC36A3Q495N2 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLC36A3Q495N2 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC36A3Q495N2 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC36A3Q495N2 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC36A3Q495N2 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
SLC36A3Q495N2 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC36A3Q495N2 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
SLC36A3Q495N2 U85056.1-201ENST00000616429 682 ntBASIC20.59■□□□□ 0.89
SLC36A3Q495N2 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC36A3Q495N2 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC36A3Q495N2 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC36A3Q495N2 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC36A3Q495N2 AC131274.2-201ENST00000580697 1507 ntBASIC20.58■□□□□ 0.89
SLC36A3Q495N2 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC36A3Q495N2 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC36A3Q495N2 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC36A3Q495N2 FAM99A-202ENST00000538190 1989 ntBASIC20.58■□□□□ 0.89
SLC36A3Q495N2 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.58■□□□□ 0.89
SLC36A3Q495N2 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SLC36A3Q495N2 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
SLC36A3Q495N2 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SLC36A3Q495N2 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SLC36A3Q495N2 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SLC36A3Q495N2 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
SLC36A3Q495N2 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.57■□□□□ 0.88
SLC36A3Q495N2 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC36A3Q495N2 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.57■□□□□ 0.88
SLC36A3Q495N2 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SLC36A3Q495N2 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.57■□□□□ 0.88
SLC36A3Q495N2 LONRF2P2-201ENST00000439212 571 ntBASIC20.57■□□□□ 0.88
SLC36A3Q495N2 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
SLC36A3Q495N2 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SLC36A3Q495N2 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.57■□□□□ 0.88
SLC36A3Q495N2 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
SLC36A3Q495N2 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SLC36A3Q495N2 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC36A3Q495N2 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
SLC36A3Q495N2 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SLC36A3Q495N2 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SLC36A3Q495N2 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC36A3Q495N2 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.56■□□□□ 0.88
SLC36A3Q495N2 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SLC36A3Q495N2 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SLC36A3Q495N2 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
SLC36A3Q495N2 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.56■□□□□ 0.88
SLC36A3Q495N2 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
SLC36A3Q495N2 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC36A3Q495N2 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
SLC36A3Q495N2 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
SLC36A3Q495N2 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
SLC36A3Q495N2 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC36A3Q495N2 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC36A3Q495N2 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC36A3Q495N2 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
SLC36A3Q495N2 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC36A3Q495N2 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SLC36A3Q495N2 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
SLC36A3Q495N2 AC011551.1-201ENST00000614101 683 ntBASIC20.55■□□□□ 0.88
SLC36A3Q495N2 AC129492.7-201ENST00000622992 756 ntBASIC20.55■□□□□ 0.88
SLC36A3Q495N2 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.55■□□□□ 0.88
SLC36A3Q495N2 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SLC36A3Q495N2 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.55■□□□□ 0.88
SLC36A3Q495N2 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.55■□□□□ 0.88
SLC36A3Q495N2 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC36A3Q495N2 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SLC36A3Q495N2 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC36A3Q495N2 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SLC36A3Q495N2 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
SLC36A3Q495N2 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SLC36A3Q495N2 AC005229.4-201ENST00000610085 2198 ntBASIC20.54■□□□□ 0.88
SLC36A3Q495N2 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC36A3Q495N2 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.54■□□□□ 0.88
SLC36A3Q495N2 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC36A3Q495N2 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC36A3Q495N2 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
SLC36A3Q495N2 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SLC36A3Q495N2 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC36A3Q495N2 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC36A3Q495N2 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SLC36A3Q495N2 AC010542.4-201ENST00000563151 1910 ntBASIC20.53■□□□□ 0.88
SLC36A3Q495N2 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SLC36A3Q495N2 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.53■□□□□ 0.88
SLC36A3Q495N2 ABHD17AP5-201ENST00000580133 923 ntBASIC20.53■□□□□ 0.88
SLC36A3Q495N2 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SLC36A3Q495N2 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SLC36A3Q495N2 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SLC36A3Q495N2 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.53■□□□□ 0.88
SLC36A3Q495N2 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC36A3Q495N2 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC36A3Q495N2 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC36A3Q495N2 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SLC36A3Q495N2 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SLC36A3Q495N2 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.53■□□□□ 0.88
SLC36A3Q495N2 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms