Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC39.82■■■■□ 3.97
HMGXB3Q12766 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC39.82■■■■□ 3.97
HMGXB3Q12766 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC39.82■■■■□ 3.97
HMGXB3Q12766 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC39.82■■■■□ 3.97
HMGXB3Q12766 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC39.82■■■■□ 3.97
HMGXB3Q12766 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC39.82■■■■□ 3.97
HMGXB3Q12766 SPI1-203ENST00000533030 661 ntTSL 2 BASIC39.82■■■■□ 3.97
HMGXB3Q12766 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC39.82■■■■□ 3.97
HMGXB3Q12766 AL121832.2-201ENST00000610979 668 ntBASIC39.82■■■■□ 3.97
HMGXB3Q12766 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC39.82■■■■□ 3.96
HMGXB3Q12766 RARA-203ENST00000394086 2008 ntTSL 2 BASIC39.82■■■■□ 3.96
HMGXB3Q12766 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC39.81■■■■□ 3.96
HMGXB3Q12766 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC39.81■■■■□ 3.96
HMGXB3Q12766 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC39.81■■■■□ 3.96
HMGXB3Q12766 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC39.81■■■■□ 3.96
HMGXB3Q12766 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC39.81■■■■□ 3.96
HMGXB3Q12766 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC39.81■■■■□ 3.96
HMGXB3Q12766 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC39.8■■■■□ 3.96
HMGXB3Q12766 BX005040.4-201ENST00000637145 1518 ntBASIC39.8■■■■□ 3.96
HMGXB3Q12766 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC39.8■■■■□ 3.96
HMGXB3Q12766 METTL15-202ENST00000403099 795 ntTSL 5 BASIC39.8■■■■□ 3.96
HMGXB3Q12766 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC39.8■■■■□ 3.96
HMGXB3Q12766 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC39.79■■■■□ 3.96
HMGXB3Q12766 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC39.79■■■■□ 3.96
HMGXB3Q12766 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC39.79■■■■□ 3.96
HMGXB3Q12766 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC39.79■■■■□ 3.96
HMGXB3Q12766 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC39.79■■■■□ 3.96
HMGXB3Q12766 TFG-210ENST00000620299 1289 ntTSL 5 BASIC39.79■■■■□ 3.96
HMGXB3Q12766 CPT2-209ENST00000636935 803 ntTSL 5 BASIC39.79■■■■□ 3.96
HMGXB3Q12766 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC39.79■■■■□ 3.96
HMGXB3Q12766 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC39.79■■■■□ 3.96
HMGXB3Q12766 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC39.78■■■■□ 3.96
HMGXB3Q12766 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC39.78■■■■□ 3.96
HMGXB3Q12766 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC39.78■■■■□ 3.96
HMGXB3Q12766 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC39.78■■■■□ 3.96
HMGXB3Q12766 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC39.78■■■■□ 3.96
HMGXB3Q12766 AC069152.1-201ENST00000438030 544 ntBASIC39.77■■■■□ 3.96
HMGXB3Q12766 AC093827.2-201ENST00000512654 315 ntBASIC39.77■■■■□ 3.96
HMGXB3Q12766 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC39.77■■■■□ 3.96
HMGXB3Q12766 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC39.77■■■■□ 3.96
HMGXB3Q12766 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC39.76■■■■□ 3.96
HMGXB3Q12766 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC39.76■■■■□ 3.96
HMGXB3Q12766 PARP1-210ENST00000629232 477 ntTSL 5 BASIC39.76■■■■□ 3.96
HMGXB3Q12766 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC39.76■■■■□ 3.96
HMGXB3Q12766 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC39.76■■■■□ 3.95
HMGXB3Q12766 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC39.75■■■■□ 3.95
HMGXB3Q12766 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC39.75■■■■□ 3.95
HMGXB3Q12766 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC39.75■■■■□ 3.95
HMGXB3Q12766 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC39.75■■■■□ 3.95
HMGXB3Q12766 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC39.75■■■■□ 3.95
HMGXB3Q12766 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC39.75■■■■□ 3.95
HMGXB3Q12766 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC39.75■■■■□ 3.95
HMGXB3Q12766 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC39.74■■■■□ 3.95
HMGXB3Q12766 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC39.74■■■■□ 3.95
HMGXB3Q12766 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC39.74■■■■□ 3.95
HMGXB3Q12766 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC39.74■■■■□ 3.95
HMGXB3Q12766 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC39.74■■■■□ 3.95
HMGXB3Q12766 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC39.73■■■■□ 3.95
HMGXB3Q12766 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC39.73■■■■□ 3.95
HMGXB3Q12766 MAZ-216ENST00000616501 991 ntTSL 5 BASIC39.73■■■■□ 3.95
HMGXB3Q12766 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC39.73■■■■□ 3.95
HMGXB3Q12766 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC39.72■■■■□ 3.95
HMGXB3Q12766 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC39.72■■■■□ 3.95
HMGXB3Q12766 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC39.72■■■■□ 3.95
HMGXB3Q12766 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC39.72■■■■□ 3.95
HMGXB3Q12766 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC39.72■■■■□ 3.95
HMGXB3Q12766 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC39.72■■■■□ 3.95
HMGXB3Q12766 OAS3-207ENST00000551007 998 ntTSL 2 BASIC39.72■■■■□ 3.95
HMGXB3Q12766 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC39.72■■■■□ 3.95
HMGXB3Q12766 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC39.72■■■■□ 3.95
HMGXB3Q12766 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC39.71■■■■□ 3.95
HMGXB3Q12766 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC39.71■■■■□ 3.95
HMGXB3Q12766 KLF13-207ENST00000560473 489 ntTSL 3 BASIC39.71■■■■□ 3.95
HMGXB3Q12766 AL138781.1-201ENST00000566567 1274 ntBASIC39.71■■■■□ 3.95
HMGXB3Q12766 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC39.71■■■■□ 3.95
HMGXB3Q12766 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC39.71■■■■□ 3.95
HMGXB3Q12766 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC39.71■■■■□ 3.95
HMGXB3Q12766 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC39.7■■■■□ 3.95
HMGXB3Q12766 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC39.7■■■■□ 3.95
HMGXB3Q12766 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC39.69■■■■□ 3.95
HMGXB3Q12766 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC39.69■■■■□ 3.94
HMGXB3Q12766 CEBPA-AS1-201ENST00000592982 2198 ntBASIC39.68■■■■□ 3.94
HMGXB3Q12766 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC39.68■■■■□ 3.94
HMGXB3Q12766 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC39.68■■■■□ 3.94
HMGXB3Q12766 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC39.68■■■■□ 3.94
HMGXB3Q12766 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC39.68■■■■□ 3.94
HMGXB3Q12766 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC39.68■■■■□ 3.94
HMGXB3Q12766 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC39.68■■■■□ 3.94
HMGXB3Q12766 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC39.68■■■■□ 3.94
HMGXB3Q12766 DUSP8P4-201ENST00000399538 1761 ntBASIC39.67■■■■□ 3.94
HMGXB3Q12766 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC39.67■■■■□ 3.94
HMGXB3Q12766 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC39.67■■■■□ 3.94
HMGXB3Q12766 AC144652.1-201ENST00000609974 1624 ntBASIC39.67■■■■□ 3.94
HMGXB3Q12766 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC39.67■■■■□ 3.94
HMGXB3Q12766 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC39.67■■■■□ 3.94
HMGXB3Q12766 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC39.67■■■■□ 3.94
HMGXB3Q12766 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC39.66■■■■□ 3.94
HMGXB3Q12766 AC098934.4-201ENST00000564127 592 ntBASIC39.66■■■■□ 3.94
HMGXB3Q12766 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC39.66■■■■□ 3.94
HMGXB3Q12766 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC39.66■■■■□ 3.94
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms