Protein–RNA interactions for Protein: Q02985

CFHR3, Complement factor H-related protein 3, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3Q02985 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC17.33■□□□□ 0.36
CFHR3Q02985 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC17.33■□□□□ 0.36
CFHR3Q02985 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CFHR3Q02985 DUSP8P3-201ENST00000399571 1760 ntBASIC17.33■□□□□ 0.36
CFHR3Q02985 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC17.33■□□□□ 0.36
CFHR3Q02985 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CFHR3Q02985 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC17.32■□□□□ 0.36
CFHR3Q02985 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CFHR3Q02985 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CFHR3Q02985 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CFHR3Q02985 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CFHR3Q02985 RASA4CP-201ENST00000424092 1398 ntBASIC17.32■□□□□ 0.36
CFHR3Q02985 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CFHR3Q02985 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC17.32■□□□□ 0.36
CFHR3Q02985 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CFHR3Q02985 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CFHR3Q02985 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CFHR3Q02985 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC17.32■□□□□ 0.36
CFHR3Q02985 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CFHR3Q02985 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CFHR3Q02985 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CFHR3Q02985 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC17.32■□□□□ 0.36
CFHR3Q02985 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CFHR3Q02985 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
CFHR3Q02985 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CFHR3Q02985 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CFHR3Q02985 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CFHR3Q02985 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CFHR3Q02985 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CFHR3Q02985 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CFHR3Q02985 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
CFHR3Q02985 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CFHR3Q02985 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CFHR3Q02985 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CFHR3Q02985 EBPL-204ENST00000378272 766 ntTSL 3 BASIC17.31■□□□□ 0.36
CFHR3Q02985 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CFHR3Q02985 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CFHR3Q02985 AC099791.1-201ENST00000416440 715 ntBASIC17.31■□□□□ 0.36
CFHR3Q02985 AC008764.7-201ENST00000593779 1081 ntBASIC17.31■□□□□ 0.36
CFHR3Q02985 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
CFHR3Q02985 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC17.31■□□□□ 0.36
CFHR3Q02985 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CFHR3Q02985 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CFHR3Q02985 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CFHR3Q02985 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CFHR3Q02985 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC17.31■□□□□ 0.36
CFHR3Q02985 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CFHR3Q02985 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CFHR3Q02985 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CFHR3Q02985 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CFHR3Q02985 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CFHR3Q02985 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CFHR3Q02985 AC004687.1-201ENST00000579003 1625 ntBASIC17.3■□□□□ 0.36
CFHR3Q02985 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CFHR3Q02985 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CFHR3Q02985 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC17.3■□□□□ 0.36
CFHR3Q02985 CA15P2-201ENST00000611168 834 ntBASIC17.3■□□□□ 0.36
CFHR3Q02985 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CFHR3Q02985 MPST-208ENST00000628507 698 ntTSL 5 BASIC17.3■□□□□ 0.36
CFHR3Q02985 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CFHR3Q02985 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC17.3■□□□□ 0.36
CFHR3Q02985 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CFHR3Q02985 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CFHR3Q02985 STX4-202ENST00000394998 1498 ntTSL 2 BASIC17.3■□□□□ 0.36
CFHR3Q02985 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CFHR3Q02985 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CFHR3Q02985 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CFHR3Q02985 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CFHR3Q02985 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CFHR3Q02985 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CFHR3Q02985 AC010525.1-201ENST00000585559 441 ntBASIC17.29■□□□□ 0.36
CFHR3Q02985 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CFHR3Q02985 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CFHR3Q02985 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CFHR3Q02985 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CFHR3Q02985 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CFHR3Q02985 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC17.28■□□□□ 0.36
CFHR3Q02985 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC17.28■□□□□ 0.36
CFHR3Q02985 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CFHR3Q02985 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CFHR3Q02985 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC17.28■□□□□ 0.36
CFHR3Q02985 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CFHR3Q02985 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC17.28■□□□□ 0.36
CFHR3Q02985 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CFHR3Q02985 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
CFHR3Q02985 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CFHR3Q02985 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CFHR3Q02985 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CFHR3Q02985 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CFHR3Q02985 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CFHR3Q02985 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CFHR3Q02985 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CFHR3Q02985 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CFHR3Q02985 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC17.27■□□□□ 0.36
CFHR3Q02985 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CFHR3Q02985 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CFHR3Q02985 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC17.27■□□□□ 0.35
CFHR3Q02985 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
CFHR3Q02985 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CFHR3Q02985 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms