Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC12.92□□□□□ -0.347e-9■■■■□ 21.2
LSM11P83369 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC12.85□□□□□ -0.359e-13■■■■□ 21.2
LSM11P83369 ELP4-223ENST00000640342 1392 ntTSL 5 BASIC12.84□□□□□ -0.359e-13■■■■□ 21.2
LSM11P83369 ELP4-217ENST00000639182 857 ntTSL 512.77□□□□□ -0.379e-13■■■■□ 21.2
LSM11P83369 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.47e-9■■■■□ 21.2
LSM11P83369 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC12.12□□□□□ -0.479e-13■■■■□ 21.2
LSM11P83369 ELP4-202ENST00000379163 1700 ntTSL 2 BASIC12.01□□□□□ -0.499e-13■■■■□ 21.2
LSM11P83369 ELP4-216ENST00000639097 906 ntTSL 511.99□□□□□ -0.499e-13■■■■□ 21.2
LSM11P83369 ELP4-214ENST00000638917 2306 ntTSL 511.9□□□□□ -0.59e-13■■■■□ 21.2
LSM11P83369 ABCD4-224ENST00000556119 838 ntTSL 511.87□□□□□ -0.517e-9■■■■□ 21.2
LSM11P83369 ABCD4-211ENST00000481935 2336 ntTSL 511.72□□□□□ -0.537e-9■■■■□ 21.2
LSM11P83369 ELP4-221ENST00000640081 2385 ntTSL 511.69□□□□□ -0.549e-13■■■■□ 21.2
LSM11P83369 ABCD4-205ENST00000469672 966 ntTSL 1 (best)11.19□□□□□ -0.627e-9■■■■□ 21.2
LSM11P83369 ELP4-222ENST00000640231 2062 ntTSL 5 BASIC11.14□□□□□ -0.639e-13■■■■□ 21.2
LSM11P83369 ABCD4-226ENST00000556971 637 ntTSL 311.13□□□□□ -0.637e-9■■■■□ 21.2
LSM11P83369 ELP4-207ENST00000638347 1651 ntTSL 5 BASIC11.02□□□□□ -0.649e-13■■■■□ 21.2
LSM11P83369 ELP4-215ENST00000638984 1330 ntTSL 510.72□□□□□ -0.699e-13■■■■□ 21.2
LSM11P83369 ABCD4-222ENST00000555617 542 ntTSL 410.36□□□□□ -0.757e-9■■■■□ 21.2
LSM11P83369 ABCD4-201ENST00000356924 3003 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.777e-9■■■■□ 21.2
LSM11P83369 ABCD4-206ENST00000470637 853 ntTSL 59.81□□□□□ -0.847e-9■■■■□ 21.2
LSM11P83369 ABCD4-221ENST00000554453 736 ntTSL 59.63□□□□□ -0.877e-9■■■■□ 21.2
LSM11P83369 COPG1-205ENST00000509889 599 ntTSL 59.44□□□□□ -0.97e-9■■■■□ 21.2
LSM11P83369 ABCD4-227ENST00000557554 523 ntTSL 48.99□□□□□ -0.977e-9■■■■□ 21.2
LSM11P83369 COPG1-210ENST00000515725 3231 ntTSL 28.45□□□□□ -1.067e-9■■■■□ 21.2
LSM11P83369 COPG1-201ENST00000314797 3078 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.167e-9■■■■□ 21.2
LSM11P83369 ELP4-229ENST00000640961 8164 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.29e-13■■■■□ 21.2
LSM11P83369 ELP4-213ENST00000638828 4647 ntTSL 23.4□□□□□ -1.879e-13■■■■□ 21.2
LSM11P83369 DPP7-211ENST00000485456 968 ntTSL 521.15■□□□□ 0.983e-8■■■■□ 21.2
LSM11P83369 DPP7-205ENST00000472306 919 ntTSL 519.58■□□□□ 0.723e-8■■■■□ 21.2
LSM11P83369 APOA2-208ENST00000481413 927 ntTSL 213.37□□□□□ -0.272e-66■■■■□ 21.1
LSM11P83369 APOA2-204ENST00000464492 530 ntTSL 3 BASIC12.76□□□□□ -0.372e-66■■■■□ 21.1
LSM11P83369 APOA2-209ENST00000481511 655 ntTSL 510.98□□□□□ -0.652e-66■■■■□ 21.1
LSM11P83369 APOA2-206ENST00000469730 265 ntTSL 59.89□□□□□ -0.832e-66■■■■□ 21.1
LSM11P83369 APOA2-203ENST00000463812 401 ntTSL 2 BASIC8.12□□□□□ -1.112e-66■■■■□ 21.1
LSM11P83369 APOA2-202ENST00000463273 469 ntTSL 1 (best)7.78□□□□□ -1.162e-66■■■■□ 21.1
LSM11P83369 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC5.83□□□□□ -1.482e-66■■■■□ 21.1
LSM11P83369 APOA2-205ENST00000468465 421 ntTSL 2 BASIC5.03□□□□□ -1.62e-66■■■■□ 21.1
LSM11P83369 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.612e-66■■■■□ 21.1
LSM11P83369 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.33□□□□□ -1.722e-66■■■■□ 21.1
LSM11P83369 MAPK12-204ENST00000467891 2019 ntTSL 527.96■■■□□ 2.072e-6■■■■□ 21.1
LSM11P83369 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.827e-6■■■■□ 21.1
LSM11P83369 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.612e-6■■■■□ 21.1
LSM11P83369 MAPK12-206ENST00000488504 1785 ntTSL 520.75■□□□□ 0.912e-6■■■■□ 21.1
LSM11P83369 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.64■□□□□ 0.892e-6■■■■□ 21.1
LSM11P83369 AC110285.6-201ENST00000617652 491 ntBASIC19.54■□□□□ 0.727e-6■■■■□ 21.1
LSM11P83369 CENPT-201ENST00000436104 1990 ntTSL 219.21■□□□□ 0.676e-7■■■■□ 21.1
LSM11P83369 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.617e-6■■■■□ 21.1
LSM11P83369 C7orf50-204ENST00000412051 1147 ntAPPRIS ALT2 TSL 218.72■□□□□ 0.597e-6■■■■□ 21.1
LSM11P83369 MYO9B-209ENST00000597073 2087 ntTSL 518.37■□□□□ 0.537e-6■■■■□ 21.1
LSM11P83369 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.05■□□□□ 0.481e-10■■■■□ 21.1
LSM11P83369 KLHDC4-207ENST00000562155 1757 ntTSL 517.99■□□□□ 0.477e-6■■■■□ 21.1
LSM11P83369 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.451e-10■■■■□ 21.1
LSM11P83369 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.457e-6■■■■□ 21.1
LSM11P83369 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.427e-6■■■■□ 21.1
LSM11P83369 C7orf50-208ENST00000491163 621 ntAPPRIS ALT2 TSL 317.59■□□□□ 0.417e-6■■■■□ 21.1
LSM11P83369 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.51■□□□□ 0.397e-6■■■■□ 21.1
LSM11P83369 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.392e-7■■■■□ 21.1
LSM11P83369 CENPT-207ENST00000562513 1669 ntTSL 517.47■□□□□ 0.396e-7■■■■□ 21.1
LSM11P83369 KLHDC4-225ENST00000569487 2072 ntTSL 217.45■□□□□ 0.387e-6■■■■□ 21.1
LSM11P83369 KIAA0895L-211ENST00000568563 1977 ntTSL 517.39■□□□□ 0.375e-7■■■■□ 21.1
LSM11P83369 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.347e-6■■■■□ 21.1
LSM11P83369 CENPT-210ENST00000563885 1931 ntTSL 517.19■□□□□ 0.346e-7■■■■□ 21.1
LSM11P83369 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.91■□□□□ 0.37e-6■■■■□ 21.1
LSM11P83369 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.88■□□□□ 0.297e-6■■■■□ 21.1
LSM11P83369 CORO7-211ENST00000572044 563 ntTSL 416.68■□□□□ 0.267e-6■■■■□ 21.1
LSM11P83369 ZNF581-202ENST00000585995 591 ntTSL 316.65■□□□□ 0.262e-7■■■■□ 21.1
LSM11P83369 MAPK12-209ENST00000497036 6248 ntTSL 216.44■□□□□ 0.222e-6■■■■□ 21.1
LSM11P83369 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.42■□□□□ 0.227e-6■■■■□ 21.1
LSM11P83369 KLHDC4-217ENST00000566661 2232 ntTSL 516.29■□□□□ 0.27e-6■■■■□ 21.1
LSM11P83369 CLUH-211ENST00000575014 4959 ntAPPRIS ALT2 TSL 516.21■□□□□ 0.191e-12■■■■□ 21.1
LSM11P83369 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.186e-7■■■■□ 21.1
LSM11P83369 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.186e-7■■■■□ 21.1
LSM11P83369 CORO7-223ENST00000574311 1737 ntTSL 516.14■□□□□ 0.177e-6■■■■□ 21.1
LSM11P83369 KIF22-206ENST00000565736 1568 ntTSL 216.11■□□□□ 0.171e-10■■■■□ 21.1
LSM11P83369 CCDC106-208ENST00000592996 741 ntTSL 316.02■□□□□ 0.162e-7■■■■□ 21.1
LSM11P83369 C7orf50-207ENST00000488073 853 ntTSL 515.88■□□□□ 0.137e-6■■■■□ 21.1
LSM11P83369 KLHDC4-202ENST00000316853 1287 ntTSL 1 (best)15.88■□□□□ 0.137e-6■■■■□ 21.1
LSM11P83369 AMDHD2-215ENST00000568263 1482 ntTSL 215.85■□□□□ 0.132e-13■■■■□ 21.1
LSM11P83369 C7orf50-206ENST00000465681 2621 ntTSL 1 (best)15.6■□□□□ 0.097e-6■■■■□ 21.1
LSM11P83369 KLHDC4-215ENST00000566349 1377 ntTSL 215.59■□□□□ 0.097e-6■■■■□ 21.1
LSM11P83369 POR-212ENST00000447222 2332 ntTSL 515.48■□□□□ 0.077e-6■■■■□ 21.1
LSM11P83369 CORO7-216ENST00000572549 663 ntTSL 515.47■□□□□ 0.077e-6■■■■□ 21.1
LSM11P83369 POR-216ENST00000454934 2295 ntTSL 315.46■□□□□ 0.067e-6■■■■□ 21.1
LSM11P83369 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.051e-12■■■■□ 21.1
LSM11P83369 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.057e-6■■■■□ 21.1
LSM11P83369 KIAA0895L-203ENST00000561679 2824 ntTSL 215.27■□□□□ 0.045e-7■■■■□ 21.1
LSM11P83369 CORO7-209ENST00000571756 1890 ntTSL 215.17■□□□□ 0.027e-6■■■■□ 21.1
LSM11P83369 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.14■□□□□ 0.012e-7■■■■□ 21.1
LSM11P83369 MYO9B-213ENST00000598419 544 ntTSL 515.02■□□□□ -07e-6■■■■□ 21.1
LSM11P83369 POR-222ENST00000493973 1028 ntTSL 214.91□□□□□ -0.027e-6■■■■□ 21.1
LSM11P83369 CORO7-230ENST00000576437 1066 ntTSL 514.87□□□□□ -0.037e-6■■■■□ 21.1
LSM11P83369 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.78□□□□□ -0.043e-6■■■■□ 21.1
LSM11P83369 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.056e-7■■■■□ 21.1
LSM11P83369 CXXC5-210ENST00000509238 542 ntTSL 214.7□□□□□ -0.067e-6■■■■□ 21.1
LSM11P83369 CXXC5-214ENST00000512816 558 ntTSL 314.7□□□□□ -0.067e-6■■■■□ 21.1
LSM11P83369 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.53□□□□□ -0.087e-6■■■■□ 21.1
LSM11P83369 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.37□□□□□ -0.116e-7■■■■□ 21.1
LSM11P83369 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.2□□□□□ -0.141e-12■■■■□ 21.1
LSM11P83369 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.13□□□□□ -0.155e-7■■■■□ 21.1
LSM11P83369 HSPA7-201ENST00000445535 1927 ntBASIC13.92□□□□□ -0.187e-6■■■■□ 21.1
Retrieved 100 of 11,495 protein–RNA pairs in 65 ms