Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
CCL20P78556 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCL20P78556 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC17.47■□□□□ 0.39
CCL20P78556 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCL20P78556 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCL20P78556 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC17.47■□□□□ 0.39
CCL20P78556 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
CCL20P78556 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CCL20P78556 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC17.46■□□□□ 0.39
CCL20P78556 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCL20P78556 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCL20P78556 AL162393.1-201ENST00000437852 946 ntBASIC17.46■□□□□ 0.39
CCL20P78556 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC17.46■□□□□ 0.39
CCL20P78556 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCL20P78556 AC087742.1-201ENST00000575880 1738 ntBASIC17.46■□□□□ 0.39
CCL20P78556 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCL20P78556 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CCL20P78556 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC17.45■□□□□ 0.38
CCL20P78556 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCL20P78556 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC17.45■□□□□ 0.38
CCL20P78556 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCL20P78556 AL391422.3-201ENST00000603791 2761 ntBASIC17.45■□□□□ 0.38
CCL20P78556 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCL20P78556 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCL20P78556 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC17.44■□□□□ 0.38
CCL20P78556 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCL20P78556 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCL20P78556 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCL20P78556 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCL20P78556 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC17.44■□□□□ 0.38
CCL20P78556 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCL20P78556 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.44■□□□□ 0.38
CCL20P78556 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC17.44■□□□□ 0.38
CCL20P78556 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CCL20P78556 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCL20P78556 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
CCL20P78556 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.43■□□□□ 0.38
CCL20P78556 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCL20P78556 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCL20P78556 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC17.43■□□□□ 0.38
CCL20P78556 DUX4L11-201ENST00000611504 1267 ntBASIC17.43■□□□□ 0.38
CCL20P78556 DUX4L12-201ENST00000614593 1267 ntBASIC17.43■□□□□ 0.38
CCL20P78556 MOB2-207ENST00000614710 705 ntTSL 5 BASIC17.43■□□□□ 0.38
CCL20P78556 DUX4L14-201ENST00000621227 1267 ntBASIC17.43■□□□□ 0.38
CCL20P78556 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CCL20P78556 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCL20P78556 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.43■□□□□ 0.38
CCL20P78556 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCL20P78556 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCL20P78556 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCL20P78556 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCL20P78556 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
CCL20P78556 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCL20P78556 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CCL20P78556 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCL20P78556 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCL20P78556 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCL20P78556 AC090877.2-201ENST00000558441 1738 ntBASIC17.42■□□□□ 0.38
CCL20P78556 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCL20P78556 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
CCL20P78556 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CCL20P78556 HGH1-207ENST00000628266 258 ntTSL 5 BASIC17.42■□□□□ 0.38
CCL20P78556 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CCL20P78556 LINC01521-201ENST00000504184 1943 ntBASIC17.42■□□□□ 0.38
CCL20P78556 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
CCL20P78556 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CCL20P78556 SMPD5-203ENST00000639008 1464 ntBASIC17.42■□□□□ 0.38
CCL20P78556 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCL20P78556 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCL20P78556 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCL20P78556 ALDH1A3-203ENST00000557963 1670 ntBASIC17.42■□□□□ 0.38
CCL20P78556 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
CCL20P78556 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCL20P78556 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCL20P78556 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCL20P78556 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CCL20P78556 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC17.41■□□□□ 0.38
CCL20P78556 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.41■□□□□ 0.38
CCL20P78556 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC17.41■□□□□ 0.38
CCL20P78556 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CCL20P78556 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCL20P78556 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCL20P78556 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCL20P78556 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCL20P78556 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.4■□□□□ 0.38
CCL20P78556 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC17.4■□□□□ 0.38
CCL20P78556 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCL20P78556 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCL20P78556 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CCL20P78556 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCL20P78556 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCL20P78556 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCL20P78556 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC17.4■□□□□ 0.38
CCL20P78556 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCL20P78556 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCL20P78556 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCL20P78556 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCL20P78556 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCL20P78556 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCL20P78556 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms