Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.39■□□□□ 0.69
NKX6-1P78426 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NKX6-1P78426 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NKX6-1P78426 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
NKX6-1P78426 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
NKX6-1P78426 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NKX6-1P78426 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NKX6-1P78426 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NKX6-1P78426 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NKX6-1P78426 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NKX6-1P78426 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NKX6-1P78426 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NKX6-1P78426 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.38■□□□□ 0.69
NKX6-1P78426 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.38■□□□□ 0.69
NKX6-1P78426 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NKX6-1P78426 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.38■□□□□ 0.69
NKX6-1P78426 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NKX6-1P78426 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NKX6-1P78426 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.37■□□□□ 0.69
NKX6-1P78426 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NKX6-1P78426 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NKX6-1P78426 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.37■□□□□ 0.69
NKX6-1P78426 AC034268.1-201ENST00000441047 882 ntBASIC19.37■□□□□ 0.69
NKX6-1P78426 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NKX6-1P78426 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.37■□□□□ 0.69
NKX6-1P78426 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NKX6-1P78426 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NKX6-1P78426 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
NKX6-1P78426 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NKX6-1P78426 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NKX6-1P78426 ABCB10P4-201ENST00000566803 2184 ntBASIC19.36■□□□□ 0.69
NKX6-1P78426 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
NKX6-1P78426 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NKX6-1P78426 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NKX6-1P78426 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NKX6-1P78426 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
NKX6-1P78426 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NKX6-1P78426 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.36■□□□□ 0.69
NKX6-1P78426 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.36■□□□□ 0.69
NKX6-1P78426 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.36■□□□□ 0.69
NKX6-1P78426 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.36■□□□□ 0.69
NKX6-1P78426 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NKX6-1P78426 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NKX6-1P78426 AL137784.2-201ENST00000607332 1000 ntBASIC19.36■□□□□ 0.69
NKX6-1P78426 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NKX6-1P78426 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NKX6-1P78426 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NKX6-1P78426 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
NKX6-1P78426 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NKX6-1P78426 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NKX6-1P78426 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NKX6-1P78426 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
NKX6-1P78426 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
NKX6-1P78426 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
NKX6-1P78426 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NKX6-1P78426 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NKX6-1P78426 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NKX6-1P78426 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NKX6-1P78426 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
NKX6-1P78426 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NKX6-1P78426 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NKX6-1P78426 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NKX6-1P78426 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.34■□□□□ 0.69
NKX6-1P78426 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.34■□□□□ 0.69
NKX6-1P78426 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NKX6-1P78426 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NKX6-1P78426 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NKX6-1P78426 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NKX6-1P78426 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.34■□□□□ 0.69
NKX6-1P78426 AC022517.1-201ENST00000592429 346 ntBASIC19.34■□□□□ 0.69
NKX6-1P78426 AC233992.3-201ENST00000607491 485 ntBASIC19.34■□□□□ 0.69
NKX6-1P78426 IKBKGP1-201ENST00000612193 1073 ntBASIC19.34■□□□□ 0.69
NKX6-1P78426 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.34■□□□□ 0.69
NKX6-1P78426 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NKX6-1P78426 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
NKX6-1P78426 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NKX6-1P78426 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.33■□□□□ 0.69
NKX6-1P78426 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
NKX6-1P78426 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
NKX6-1P78426 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NKX6-1P78426 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
NKX6-1P78426 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
NKX6-1P78426 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.33■□□□□ 0.68
NKX6-1P78426 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.33■□□□□ 0.68
NKX6-1P78426 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.33■□□□□ 0.68
NKX6-1P78426 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.33■□□□□ 0.68
NKX6-1P78426 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.33■□□□□ 0.68
NKX6-1P78426 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.33■□□□□ 0.68
NKX6-1P78426 AC136469.2-201ENST00000623944 1028 ntBASIC19.33■□□□□ 0.68
NKX6-1P78426 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.33■□□□□ 0.68
NKX6-1P78426 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.33■□□□□ 0.68
NKX6-1P78426 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
NKX6-1P78426 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NKX6-1P78426 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
NKX6-1P78426 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NKX6-1P78426 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
NKX6-1P78426 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NKX6-1P78426 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NKX6-1P78426 AC006455.2-201ENST00000429931 906 ntBASIC19.32■□□□□ 0.68
NKX6-1P78426 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms