Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN20P56880 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.24■□□□□ 0.83
CLDN20P56880 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN20P56880 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN20P56880 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN20P56880 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN20P56880 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN20P56880 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN20P56880 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
CLDN20P56880 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.23■□□□□ 0.83
CLDN20P56880 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CLDN20P56880 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN20P56880 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN20P56880 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN20P56880 AC110285.6-201ENST00000617652 491 ntBASIC20.23■□□□□ 0.83
CLDN20P56880 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CLDN20P56880 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CLDN20P56880 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN20P56880 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.23■□□□□ 0.83
CLDN20P56880 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CLDN20P56880 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN20P56880 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CLDN20P56880 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLDN20P56880 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CLDN20P56880 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CLDN20P56880 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLDN20P56880 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLDN20P56880 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CLDN20P56880 AC233723.2-201ENST00000623798 2106 ntBASIC20.22■□□□□ 0.83
CLDN20P56880 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CLDN20P56880 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLDN20P56880 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CLDN20P56880 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLDN20P56880 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CLDN20P56880 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CLDN20P56880 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLDN20P56880 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CLDN20P56880 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.21■□□□□ 0.83
CLDN20P56880 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.21■□□□□ 0.83
CLDN20P56880 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.21■□□□□ 0.83
CLDN20P56880 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
CLDN20P56880 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CLDN20P56880 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CLDN20P56880 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.21■□□□□ 0.83
CLDN20P56880 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLDN20P56880 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
CLDN20P56880 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.83
CLDN20P56880 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CLDN20P56880 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLDN20P56880 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLDN20P56880 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLDN20P56880 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.2■□□□□ 0.82
CLDN20P56880 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.2■□□□□ 0.82
CLDN20P56880 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLDN20P56880 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.2■□□□□ 0.82
CLDN20P56880 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLDN20P56880 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CLDN20P56880 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CLDN20P56880 UNC93B3-201ENST00000308076 687 ntBASIC20.2■□□□□ 0.82
CLDN20P56880 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CLDN20P56880 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CLDN20P56880 AL139246.5-201ENST00000606645 996 ntBASIC20.2■□□□□ 0.82
CLDN20P56880 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CLDN20P56880 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLDN20P56880 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLDN20P56880 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.2■□□□□ 0.82
CLDN20P56880 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLDN20P56880 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLDN20P56880 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CLDN20P56880 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.19■□□□□ 0.82
CLDN20P56880 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CLDN20P56880 AC006455.2-201ENST00000429931 906 ntBASIC20.19■□□□□ 0.82
CLDN20P56880 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.19■□□□□ 0.82
CLDN20P56880 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLDN20P56880 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.19■□□□□ 0.82
CLDN20P56880 AC241377.3-202ENST00000626088 1088 ntBASIC20.19■□□□□ 0.82
CLDN20P56880 AC241585.3-202ENST00000628937 1088 ntBASIC20.19■□□□□ 0.82
CLDN20P56880 AC245100.8-202ENST00000629247 1058 ntBASIC20.19■□□□□ 0.82
CLDN20P56880 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CLDN20P56880 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLDN20P56880 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLDN20P56880 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CLDN20P56880 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.19■□□□□ 0.82
CLDN20P56880 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLDN20P56880 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLDN20P56880 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.18■□□□□ 0.82
CLDN20P56880 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CLDN20P56880 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CLDN20P56880 AC092171.4-201ENST00000609130 632 ntBASIC20.18■□□□□ 0.82
CLDN20P56880 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CLDN20P56880 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLDN20P56880 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLDN20P56880 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLDN20P56880 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN20P56880 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN20P56880 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN20P56880 SYT6-210ENST00000641643 1587 ntBASIC20.17■□□□□ 0.82
CLDN20P56880 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CLDN20P56880 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN20P56880 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms