Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF144AP50876 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
RNF144AP50876 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF144AP50876 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF144AP50876 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF144AP50876 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF144AP50876 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RNF144AP50876 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
RNF144AP50876 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
RNF144AP50876 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF144AP50876 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF144AP50876 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.5■□□□□ 0.87
RNF144AP50876 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.5■□□□□ 0.87
RNF144AP50876 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF144AP50876 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
RNF144AP50876 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.5■□□□□ 0.87
RNF144AP50876 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF144AP50876 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.49■□□□□ 0.87
RNF144AP50876 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF144AP50876 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF144AP50876 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RNF144AP50876 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF144AP50876 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RNF144AP50876 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RNF144AP50876 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.49■□□□□ 0.87
RNF144AP50876 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.49■□□□□ 0.87
RNF144AP50876 AC233723.2-201ENST00000623798 2106 ntBASIC20.49■□□□□ 0.87
RNF144AP50876 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF144AP50876 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RNF144AP50876 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RNF144AP50876 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF144AP50876 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.48■□□□□ 0.87
RNF144AP50876 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.48■□□□□ 0.87
RNF144AP50876 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF144AP50876 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF144AP50876 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RNF144AP50876 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RNF144AP50876 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF144AP50876 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
RNF144AP50876 C17orf82-201ENST00000623772 1530 ntBASIC20.48■□□□□ 0.87
RNF144AP50876 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.47■□□□□ 0.87
RNF144AP50876 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RNF144AP50876 LINC01529-204ENST00000636474 1715 ntBASIC20.47■□□□□ 0.87
RNF144AP50876 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
RNF144AP50876 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.47■□□□□ 0.87
RNF144AP50876 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
RNF144AP50876 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
RNF144AP50876 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.47■□□□□ 0.87
RNF144AP50876 AL356740.2-201ENST00000601559 647 ntBASIC20.47■□□□□ 0.87
RNF144AP50876 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RNF144AP50876 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
RNF144AP50876 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
RNF144AP50876 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
RNF144AP50876 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF144AP50876 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF144AP50876 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RNF144AP50876 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF144AP50876 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF144AP50876 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF144AP50876 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.46■□□□□ 0.87
RNF144AP50876 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.46■□□□□ 0.87
RNF144AP50876 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.46■□□□□ 0.87
RNF144AP50876 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
RNF144AP50876 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF144AP50876 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF144AP50876 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF144AP50876 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF144AP50876 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
RNF144AP50876 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
RNF144AP50876 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.45■□□□□ 0.87
RNF144AP50876 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.87
RNF144AP50876 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.45■□□□□ 0.86
RNF144AP50876 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RNF144AP50876 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF144AP50876 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.45■□□□□ 0.86
RNF144AP50876 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
RNF144AP50876 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF144AP50876 AC006455.2-201ENST00000429931 906 ntBASIC20.45■□□□□ 0.86
RNF144AP50876 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.45■□□□□ 0.86
RNF144AP50876 MIR3621-201ENST00000580529 85 ntBASIC20.45■□□□□ 0.86
RNF144AP50876 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.45■□□□□ 0.86
RNF144AP50876 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
RNF144AP50876 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF144AP50876 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.45■□□□□ 0.86
RNF144AP50876 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RNF144AP50876 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.44■□□□□ 0.86
RNF144AP50876 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RNF144AP50876 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.44■□□□□ 0.86
RNF144AP50876 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF144AP50876 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF144AP50876 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
RNF144AP50876 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF144AP50876 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RNF144AP50876 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
RNF144AP50876 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
RNF144AP50876 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RNF144AP50876 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RNF144AP50876 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.43■□□□□ 0.86
RNF144AP50876 AC131212.1-201ENST00000613771 668 ntBASIC20.43■□□□□ 0.86
RNF144AP50876 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms