Protein–RNA interactions for Protein: P42773

CDKN2C, Cyclin-dependent kinase 4 inhibitor C, humanhuman

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2CP42773 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CDKN2CP42773 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDKN2CP42773 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.96■□□□□ 0.95
CDKN2CP42773 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.96■□□□□ 0.95
CDKN2CP42773 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDKN2CP42773 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CDKN2CP42773 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDKN2CP42773 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
CDKN2CP42773 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.96■□□□□ 0.95
CDKN2CP42773 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
CDKN2CP42773 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.95■□□□□ 0.95
CDKN2CP42773 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.95■□□□□ 0.95
CDKN2CP42773 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDKN2CP42773 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDKN2CP42773 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDKN2CP42773 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
CDKN2CP42773 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDKN2CP42773 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CDKN2CP42773 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDKN2CP42773 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CDKN2CP42773 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDKN2CP42773 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDKN2CP42773 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDKN2CP42773 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDKN2CP42773 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CDKN2CP42773 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.95■□□□□ 0.94
CDKN2CP42773 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDKN2CP42773 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CDKN2CP42773 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
CDKN2CP42773 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CDKN2CP42773 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDKN2CP42773 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDKN2CP42773 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.95■□□□□ 0.94
CDKN2CP42773 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.94■□□□□ 0.94
CDKN2CP42773 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDKN2CP42773 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDKN2CP42773 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDKN2CP42773 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.94■□□□□ 0.94
CDKN2CP42773 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.94■□□□□ 0.94
CDKN2CP42773 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.94■□□□□ 0.94
CDKN2CP42773 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CDKN2CP42773 MIR6722-201ENST00000617286 78 ntBASIC20.94■□□□□ 0.94
CDKN2CP42773 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDKN2CP42773 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDKN2CP42773 AC005703.6-201ENST00000623265 1329 ntBASIC20.94■□□□□ 0.94
CDKN2CP42773 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDKN2CP42773 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
CDKN2CP42773 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDKN2CP42773 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDKN2CP42773 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDKN2CP42773 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.93■□□□□ 0.94
CDKN2CP42773 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDKN2CP42773 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDKN2CP42773 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.93■□□□□ 0.94
CDKN2CP42773 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDKN2CP42773 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.93■□□□□ 0.94
CDKN2CP42773 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDKN2CP42773 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDKN2CP42773 AC137767.1-201ENST00000602918 1920 ntBASIC20.92■□□□□ 0.94
CDKN2CP42773 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.92■□□□□ 0.94
CDKN2CP42773 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDKN2CP42773 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDKN2CP42773 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDKN2CP42773 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDKN2CP42773 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CDKN2CP42773 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDKN2CP42773 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDKN2CP42773 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CDKN2CP42773 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDKN2CP42773 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.91■□□□□ 0.94
CDKN2CP42773 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDKN2CP42773 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.91■□□□□ 0.94
CDKN2CP42773 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CDKN2CP42773 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.91■□□□□ 0.94
CDKN2CP42773 LINC01529-204ENST00000636474 1715 ntBASIC20.91■□□□□ 0.94
CDKN2CP42773 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDKN2CP42773 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CDKN2CP42773 AC092053.2-201ENST00000640557 1818 ntBASIC20.9■□□□□ 0.94
CDKN2CP42773 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CDKN2CP42773 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.9■□□□□ 0.94
CDKN2CP42773 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDKN2CP42773 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.9■□□□□ 0.94
CDKN2CP42773 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
CDKN2CP42773 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDKN2CP42773 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CDKN2CP42773 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDKN2CP42773 AC007375.3-201ENST00000600936 2314 ntBASIC20.9■□□□□ 0.94
CDKN2CP42773 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDKN2CP42773 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.9■□□□□ 0.94
CDKN2CP42773 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDKN2CP42773 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CDKN2CP42773 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
CDKN2CP42773 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CDKN2CP42773 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDKN2CP42773 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDKN2CP42773 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
CDKN2CP42773 BX664725.1-201ENST00000438252 379 ntBASIC20.89■□□□□ 0.93
CDKN2CP42773 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDKN2CP42773 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.89■□□□□ 0.93
CDKN2CP42773 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms