Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
GDF1P27539 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
GDF1P27539 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
GDF1P27539 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
GDF1P27539 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
GDF1P27539 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
GDF1P27539 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
GDF1P27539 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
GDF1P27539 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
GDF1P27539 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.08■□□□□ 0.81
GDF1P27539 AC093323.1-202ENST00000635031 2045 ntBASIC20.08■□□□□ 0.8
GDF1P27539 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
GDF1P27539 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.8
GDF1P27539 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
GDF1P27539 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
GDF1P27539 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GDF1P27539 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
GDF1P27539 TSPY26P-201ENST00000476365 1326 ntBASIC20.07■□□□□ 0.8
GDF1P27539 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GDF1P27539 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
GDF1P27539 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GDF1P27539 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GDF1P27539 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GDF1P27539 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.07■□□□□ 0.8
GDF1P27539 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
GDF1P27539 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
GDF1P27539 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.07■□□□□ 0.8
GDF1P27539 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
GDF1P27539 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
GDF1P27539 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
GDF1P27539 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.07■□□□□ 0.8
GDF1P27539 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
GDF1P27539 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GDF1P27539 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GDF1P27539 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
GDF1P27539 IRS3P-201ENST00000223076 1006 ntBASIC20.06■□□□□ 0.8
GDF1P27539 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
GDF1P27539 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
GDF1P27539 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GDF1P27539 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.06■□□□□ 0.8
GDF1P27539 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
GDF1P27539 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.06■□□□□ 0.8
GDF1P27539 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
GDF1P27539 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
GDF1P27539 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.06■□□□□ 0.8
GDF1P27539 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GDF1P27539 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GDF1P27539 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
GDF1P27539 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GDF1P27539 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.05■□□□□ 0.8
GDF1P27539 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.05■□□□□ 0.8
GDF1P27539 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GDF1P27539 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.05■□□□□ 0.8
GDF1P27539 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
GDF1P27539 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
GDF1P27539 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
GDF1P27539 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
GDF1P27539 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
GDF1P27539 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.04■□□□□ 0.8
GDF1P27539 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.04■□□□□ 0.8
GDF1P27539 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GDF1P27539 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
GDF1P27539 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
GDF1P27539 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GDF1P27539 IGHV3-19-201ENST00000521488 291 ntBASIC20.04■□□□□ 0.8
GDF1P27539 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
GDF1P27539 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.04■□□□□ 0.8
GDF1P27539 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.04■□□□□ 0.8
GDF1P27539 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
GDF1P27539 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
GDF1P27539 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
GDF1P27539 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GDF1P27539 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
GDF1P27539 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.03■□□□□ 0.8
GDF1P27539 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.03■□□□□ 0.8
GDF1P27539 AC092068.2-201ENST00000590491 1708 ntBASIC20.03■□□□□ 0.8
GDF1P27539 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
GDF1P27539 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
GDF1P27539 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GDF1P27539 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.03■□□□□ 0.8
GDF1P27539 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.03■□□□□ 0.8
GDF1P27539 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.03■□□□□ 0.8
GDF1P27539 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
GDF1P27539 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.03■□□□□ 0.8
GDF1P27539 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.03■□□□□ 0.8
GDF1P27539 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.02■□□□□ 0.8
GDF1P27539 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
GDF1P27539 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
GDF1P27539 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
GDF1P27539 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GDF1P27539 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.02■□□□□ 0.8
GDF1P27539 RARRES2P6-201ENST00000567333 442 ntBASIC20.02■□□□□ 0.8
GDF1P27539 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
GDF1P27539 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.02■□□□□ 0.8
GDF1P27539 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
GDF1P27539 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
GDF1P27539 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
GDF1P27539 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
GDF1P27539 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
GDF1P27539 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms