Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HLA-DOBP13765 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HLA-DOBP13765 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.83■□□□□ 0.77
HLA-DOBP13765 AL512631.2-201ENST00000604634 923 ntBASIC19.83■□□□□ 0.77
HLA-DOBP13765 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HLA-DOBP13765 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HLA-DOBP13765 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
HLA-DOBP13765 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.83■□□□□ 0.76
HLA-DOBP13765 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.82■□□□□ 0.76
HLA-DOBP13765 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DOBP13765 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DOBP13765 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.82■□□□□ 0.76
HLA-DOBP13765 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.82■□□□□ 0.76
HLA-DOBP13765 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.82■□□□□ 0.76
HLA-DOBP13765 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DOBP13765 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DOBP13765 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DOBP13765 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.82■□□□□ 0.76
HLA-DOBP13765 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DOBP13765 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
HLA-DOBP13765 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DOBP13765 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DOBP13765 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DOBP13765 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
HLA-DOBP13765 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DOBP13765 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.81■□□□□ 0.76
HLA-DOBP13765 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.81■□□□□ 0.76
HLA-DOBP13765 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.81■□□□□ 0.76
HLA-DOBP13765 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.81■□□□□ 0.76
HLA-DOBP13765 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.81■□□□□ 0.76
HLA-DOBP13765 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
HLA-DOBP13765 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
HLA-DOBP13765 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DOBP13765 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.81■□□□□ 0.76
HLA-DOBP13765 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DOBP13765 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DOBP13765 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
HLA-DOBP13765 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
HLA-DOBP13765 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DOBP13765 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DOBP13765 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.8■□□□□ 0.76
HLA-DOBP13765 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.8■□□□□ 0.76
HLA-DOBP13765 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DOBP13765 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.8■□□□□ 0.76
HLA-DOBP13765 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.8■□□□□ 0.76
HLA-DOBP13765 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DOBP13765 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DOBP13765 AC006455.2-201ENST00000429931 906 ntBASIC19.8■□□□□ 0.76
HLA-DOBP13765 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.8■□□□□ 0.76
HLA-DOBP13765 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DOBP13765 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DOBP13765 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DOBP13765 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
HLA-DOBP13765 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DOBP13765 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
HLA-DOBP13765 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
HLA-DOBP13765 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DOBP13765 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
HLA-DOBP13765 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
HLA-DOBP13765 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.79■□□□□ 0.76
HLA-DOBP13765 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.79■□□□□ 0.76
HLA-DOBP13765 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DOBP13765 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.79■□□□□ 0.76
HLA-DOBP13765 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DOBP13765 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.78■□□□□ 0.76
HLA-DOBP13765 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DOBP13765 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.78■□□□□ 0.76
HLA-DOBP13765 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DOBP13765 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.78■□□□□ 0.76
HLA-DOBP13765 AC099791.2-201ENST00000605725 427 ntBASIC19.78■□□□□ 0.76
HLA-DOBP13765 MIR4466-201ENST00000606121 54 ntBASIC19.78■□□□□ 0.76
HLA-DOBP13765 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DOBP13765 AC009086.3-201ENST00000623486 1008 ntBASIC19.78■□□□□ 0.76
HLA-DOBP13765 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.78■□□□□ 0.76
HLA-DOBP13765 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
HLA-DOBP13765 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DOBP13765 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DOBP13765 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DOBP13765 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DOBP13765 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DOBP13765 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DOBP13765 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DOBP13765 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HLA-DOBP13765 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
HLA-DOBP13765 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HLA-DOBP13765 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.77■□□□□ 0.76
HLA-DOBP13765 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.77■□□□□ 0.76
HLA-DOBP13765 AC004687.1-201ENST00000579003 1625 ntBASIC19.77■□□□□ 0.76
HLA-DOBP13765 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
HLA-DOBP13765 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.77■□□□□ 0.76
HLA-DOBP13765 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
HLA-DOBP13765 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HLA-DOBP13765 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HLA-DOBP13765 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.77■□□□□ 0.76
HLA-DOBP13765 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HLA-DOBP13765 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.77■□□□□ 0.76
HLA-DOBP13765 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.77■□□□□ 0.76
HLA-DOBP13765 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HLA-DOBP13765 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
HLA-DOBP13765 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms