Protein–RNA interactions for Protein: P08779

KRT16, Keratin, type I cytoskeletal 16, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT16P08779 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.82■■□□□ 1.08
KRT16P08779 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
KRT16P08779 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
KRT16P08779 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
KRT16P08779 AL592295.1-201ENST00000400984 884 ntBASIC21.82■■□□□ 1.08
KRT16P08779 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.82■■□□□ 1.08
KRT16P08779 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
KRT16P08779 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
KRT16P08779 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
KRT16P08779 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
KRT16P08779 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
KRT16P08779 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
KRT16P08779 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.82■■□□□ 1.08
KRT16P08779 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.82■■□□□ 1.08
KRT16P08779 RNF165-205ENST00000588679 2904 ntBASIC21.82■■□□□ 1.08
KRT16P08779 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.82■■□□□ 1.08
KRT16P08779 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
KRT16P08779 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
KRT16P08779 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
KRT16P08779 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
KRT16P08779 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
KRT16P08779 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
KRT16P08779 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
KRT16P08779 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.81■■□□□ 1.08
KRT16P08779 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
KRT16P08779 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.81■■□□□ 1.08
KRT16P08779 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.81■■□□□ 1.08
KRT16P08779 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
KRT16P08779 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
KRT16P08779 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
KRT16P08779 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
KRT16P08779 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.8■■□□□ 1.08
KRT16P08779 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
KRT16P08779 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
KRT16P08779 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
KRT16P08779 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
KRT16P08779 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
KRT16P08779 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
KRT16P08779 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
KRT16P08779 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.8■■□□□ 1.08
KRT16P08779 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
KRT16P08779 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.8■■□□□ 1.08
KRT16P08779 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
KRT16P08779 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
KRT16P08779 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
KRT16P08779 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
KRT16P08779 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
KRT16P08779 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
KRT16P08779 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
KRT16P08779 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
KRT16P08779 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
KRT16P08779 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
KRT16P08779 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
KRT16P08779 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
KRT16P08779 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.79■■□□□ 1.08
KRT16P08779 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
KRT16P08779 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
KRT16P08779 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.79■■□□□ 1.08
KRT16P08779 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.78■■□□□ 1.08
KRT16P08779 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.78■■□□□ 1.08
KRT16P08779 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.78■■□□□ 1.08
KRT16P08779 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.78■■□□□ 1.08
KRT16P08779 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
KRT16P08779 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
KRT16P08779 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
KRT16P08779 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
KRT16P08779 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
KRT16P08779 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
KRT16P08779 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
KRT16P08779 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
KRT16P08779 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
KRT16P08779 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
KRT16P08779 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
KRT16P08779 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.77■■□□□ 1.08
KRT16P08779 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
KRT16P08779 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
KRT16P08779 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
KRT16P08779 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
KRT16P08779 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
KRT16P08779 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
KRT16P08779 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
KRT16P08779 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
KRT16P08779 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
KRT16P08779 AC005229.4-201ENST00000610085 2198 ntBASIC21.76■■□□□ 1.07
KRT16P08779 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
KRT16P08779 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
KRT16P08779 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
KRT16P08779 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
KRT16P08779 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KRT16P08779 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KRT16P08779 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KRT16P08779 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.75■■□□□ 1.07
KRT16P08779 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KRT16P08779 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KRT16P08779 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KRT16P08779 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KRT16P08779 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KRT16P08779 LONRF2P2-201ENST00000439212 571 ntBASIC21.75■■□□□ 1.07
KRT16P08779 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KRT16P08779 AC139795.1-202ENST00000500444 432 ntBASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms