Protein–RNA interactions for Protein: P08237

PFKM, ATP-dependent 6-phosphofructokinase, muscle type, humanhuman

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFKMP08237 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC24.45■■□□□ 1.5
PFKMP08237 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
PFKMP08237 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
PFKMP08237 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
PFKMP08237 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC24.45■■□□□ 1.5
PFKMP08237 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
PFKMP08237 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
PFKMP08237 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
PFKMP08237 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC24.45■■□□□ 1.5
PFKMP08237 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PFKMP08237 GAS2L1P2-201ENST00000436355 1356 ntBASIC24.44■■□□□ 1.5
PFKMP08237 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PFKMP08237 EI24-204ENST00000527235 1625 ntTSL 5 BASIC24.44■■□□□ 1.5
PFKMP08237 AC010525.1-201ENST00000585559 441 ntBASIC24.44■■□□□ 1.5
PFKMP08237 AC105233.4-201ENST00000642045 216 ntBASIC24.44■■□□□ 1.5
PFKMP08237 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
PFKMP08237 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC24.44■■□□□ 1.5
PFKMP08237 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
PFKMP08237 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC24.44■■□□□ 1.5
PFKMP08237 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PFKMP08237 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC24.44■■□□□ 1.5
PFKMP08237 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
PFKMP08237 FP325331.1-202ENST00000623531 1380 ntBASIC24.43■■□□□ 1.5
PFKMP08237 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
PFKMP08237 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
PFKMP08237 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
PFKMP08237 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC24.43■■□□□ 1.5
PFKMP08237 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC24.43■■□□□ 1.5
PFKMP08237 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
PFKMP08237 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PFKMP08237 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PFKMP08237 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC24.43■■□□□ 1.5
PFKMP08237 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
PFKMP08237 LINC00543-201ENST00000567234 1845 ntBASIC24.42■■□□□ 1.5
PFKMP08237 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
PFKMP08237 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PFKMP08237 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC24.42■■□□□ 1.5
PFKMP08237 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
PFKMP08237 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
PFKMP08237 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
PFKMP08237 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
PFKMP08237 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC24.42■■□□□ 1.5
PFKMP08237 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC24.42■■□□□ 1.5
PFKMP08237 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC24.42■■□□□ 1.5
PFKMP08237 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
PFKMP08237 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
PFKMP08237 AC016769.1-201ENST00000409132 1010 ntBASIC24.41■■□□□ 1.5
PFKMP08237 MFF-208ENST00000409616 1247 ntTSL 5 BASIC24.41■■□□□ 1.5
PFKMP08237 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC24.41■■□□□ 1.5
PFKMP08237 DUX4L4-201ENST00000566884 1269 ntBASIC24.41■■□□□ 1.5
PFKMP08237 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PFKMP08237 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
PFKMP08237 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
PFKMP08237 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC24.4■■□□□ 1.5
PFKMP08237 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PFKMP08237 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC24.4■■□□□ 1.5
PFKMP08237 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
PFKMP08237 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC24.4■■□□□ 1.5
PFKMP08237 RAP2CP1-201ENST00000605103 478 ntBASIC24.4■■□□□ 1.5
PFKMP08237 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC24.4■■□□□ 1.5
PFKMP08237 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PFKMP08237 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
PFKMP08237 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
PFKMP08237 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC24.39■■□□□ 1.5
PFKMP08237 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC24.39■■□□□ 1.5
PFKMP08237 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
PFKMP08237 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC24.39■■□□□ 1.5
PFKMP08237 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
PFKMP08237 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
PFKMP08237 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC24.39■■□□□ 1.49
PFKMP08237 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
PFKMP08237 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PFKMP08237 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PFKMP08237 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC24.38■■□□□ 1.49
PFKMP08237 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
PFKMP08237 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC24.38■■□□□ 1.49
PFKMP08237 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC24.38■■□□□ 1.49
PFKMP08237 AC137761.2-201ENST00000561729 223 ntBASIC24.38■■□□□ 1.49
PFKMP08237 AC145350.3-201ENST00000569033 163 ntBASIC24.38■■□□□ 1.49
PFKMP08237 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
PFKMP08237 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PFKMP08237 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC24.38■■□□□ 1.49
PFKMP08237 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PFKMP08237 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
PFKMP08237 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
PFKMP08237 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
PFKMP08237 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC24.37■■□□□ 1.49
PFKMP08237 GALNS-213ENST00000569433 723 ntTSL 3 BASIC24.37■■□□□ 1.49
PFKMP08237 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC24.37■■□□□ 1.49
PFKMP08237 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PFKMP08237 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC24.36■■□□□ 1.49
PFKMP08237 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
PFKMP08237 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC24.36■■□□□ 1.49
PFKMP08237 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
PFKMP08237 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PFKMP08237 AC073111.5-205ENST00000641717 521 ntBASIC24.36■■□□□ 1.49
PFKMP08237 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PFKMP08237 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PFKMP08237 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC24.36■■□□□ 1.49
PFKMP08237 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms