Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC073111.5-205ENST00000641717 521 ntBASIC22.37■■□□□ 1.17
RETP07949 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RETP07949 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC22.37■■□□□ 1.17
RETP07949 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RETP07949 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RETP07949 GAS2L1P2-201ENST00000436355 1356 ntBASIC22.37■■□□□ 1.17
RETP07949 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC22.37■■□□□ 1.17
RETP07949 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RETP07949 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
RETP07949 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RETP07949 AC016769.1-201ENST00000409132 1010 ntBASIC22.36■■□□□ 1.17
RETP07949 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
RETP07949 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RETP07949 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC22.36■■□□□ 1.17
RETP07949 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC22.36■■□□□ 1.17
RETP07949 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
RETP07949 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RETP07949 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RETP07949 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC22.35■■□□□ 1.17
RETP07949 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
RETP07949 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC22.35■■□□□ 1.17
RETP07949 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC22.35■■□□□ 1.17
RETP07949 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RETP07949 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RETP07949 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC22.35■■□□□ 1.17
RETP07949 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
RETP07949 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
RETP07949 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC22.35■■□□□ 1.17
RETP07949 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RETP07949 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC22.35■■□□□ 1.17
RETP07949 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC22.35■■□□□ 1.17
RETP07949 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC22.34■■□□□ 1.17
RETP07949 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC22.34■■□□□ 1.17
RETP07949 AC141586.4-201ENST00000624558 1573 ntBASIC22.34■■□□□ 1.17
RETP07949 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC22.34■■□□□ 1.17
RETP07949 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RETP07949 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
RETP07949 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
RETP07949 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC22.34■■□□□ 1.17
RETP07949 AC026185.1-201ENST00000445748 174 ntBASIC22.34■■□□□ 1.17
RETP07949 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC22.34■■□□□ 1.17
RETP07949 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RETP07949 PPP1R14BP3-201ENST00000509033 445 ntBASIC22.34■■□□□ 1.17
RETP07949 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
RETP07949 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC22.34■■□□□ 1.17
RETP07949 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
RETP07949 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
RETP07949 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC22.34■■□□□ 1.17
RETP07949 SLC6A10P-202ENST00000431994 2058 ntBASIC22.34■■□□□ 1.17
RETP07949 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
RETP07949 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RETP07949 MPST-204ENST00000404393 1329 ntTSL 5 BASIC22.33■■□□□ 1.17
RETP07949 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC22.33■■□□□ 1.17
RETP07949 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC22.33■■□□□ 1.17
RETP07949 LHPP-203ENST00000392757 840 ntTSL 3 BASIC22.33■■□□□ 1.17
RETP07949 NT5C3AP1-201ENST00000394500 1012 ntBASIC22.33■■□□□ 1.17
RETP07949 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC22.33■■□□□ 1.17
RETP07949 AC137761.2-201ENST00000561729 223 ntBASIC22.33■■□□□ 1.17
RETP07949 AC145350.3-201ENST00000569033 163 ntBASIC22.33■■□□□ 1.17
RETP07949 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC22.33■■□□□ 1.17
RETP07949 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.16
RETP07949 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
RETP07949 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
RETP07949 LINC00543-201ENST00000567234 1845 ntBASIC22.32■■□□□ 1.16
RETP07949 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
RETP07949 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC22.32■■□□□ 1.16
RETP07949 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC22.32■■□□□ 1.16
RETP07949 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC22.32■■□□□ 1.16
RETP07949 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
RETP07949 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RETP07949 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC22.32■■□□□ 1.16
RETP07949 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RETP07949 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC22.31■■□□□ 1.16
RETP07949 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RETP07949 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
RETP07949 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
RETP07949 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC22.31■■□□□ 1.16
RETP07949 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.31■■□□□ 1.16
RETP07949 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RETP07949 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RETP07949 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RETP07949 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
RETP07949 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC22.3■■□□□ 1.16
RETP07949 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
RETP07949 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
RETP07949 AL355802.2-201ENST00000402069 882 ntBASIC22.3■■□□□ 1.16
RETP07949 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC22.3■■□□□ 1.16
RETP07949 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC22.3■■□□□ 1.16
RETP07949 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RETP07949 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC22.3■■□□□ 1.16
RETP07949 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RETP07949 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RETP07949 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RETP07949 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
RETP07949 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RETP07949 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
RETP07949 MAP2K4P1-201ENST00000438453 1195 ntBASIC22.29■■□□□ 1.16
RETP07949 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC22.29■■□□□ 1.16
RETP07949 AL109923.1-201ENST00000618799 583 ntBASIC22.29■■□□□ 1.16
RETP07949 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC22.29■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms