Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.11■□□□□ 0.97
CTSBP07858 AC126544.1-201ENST00000580842 1059 ntBASIC21.11■□□□□ 0.97
CTSBP07858 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CTSBP07858 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CTSBP07858 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.11■□□□□ 0.97
CTSBP07858 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CTSBP07858 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CTSBP07858 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CTSBP07858 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CTSBP07858 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CTSBP07858 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.1■□□□□ 0.97
CTSBP07858 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.1■□□□□ 0.97
CTSBP07858 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CTSBP07858 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CTSBP07858 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
CTSBP07858 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CTSBP07858 AC092068.2-201ENST00000590491 1708 ntBASIC21.09■□□□□ 0.97
CTSBP07858 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CTSBP07858 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CTSBP07858 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CTSBP07858 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CTSBP07858 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CTSBP07858 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
CTSBP07858 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CTSBP07858 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.09■□□□□ 0.97
CTSBP07858 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CTSBP07858 OR2I1P-207ENST00000453522 948 ntBASIC21.09■□□□□ 0.97
CTSBP07858 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.09■□□□□ 0.97
CTSBP07858 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.09■□□□□ 0.97
CTSBP07858 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
CTSBP07858 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.09■□□□□ 0.97
CTSBP07858 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CTSBP07858 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CTSBP07858 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CTSBP07858 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CTSBP07858 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.09■□□□□ 0.97
CTSBP07858 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.09■□□□□ 0.97
CTSBP07858 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
CTSBP07858 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CTSBP07858 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.08■□□□□ 0.97
CTSBP07858 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.08■□□□□ 0.97
CTSBP07858 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CTSBP07858 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.08■□□□□ 0.97
CTSBP07858 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
CTSBP07858 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.08■□□□□ 0.96
CTSBP07858 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CTSBP07858 TSPY26P-201ENST00000476365 1326 ntBASIC21.07■□□□□ 0.96
CTSBP07858 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CTSBP07858 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CTSBP07858 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.07■□□□□ 0.96
CTSBP07858 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CTSBP07858 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
CTSBP07858 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
CTSBP07858 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CTSBP07858 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CTSBP07858 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.07■□□□□ 0.96
CTSBP07858 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.07■□□□□ 0.96
CTSBP07858 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CTSBP07858 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CTSBP07858 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CTSBP07858 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CTSBP07858 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CTSBP07858 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CTSBP07858 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CTSBP07858 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTSBP07858 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTSBP07858 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
CTSBP07858 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTSBP07858 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CTSBP07858 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
CTSBP07858 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CTSBP07858 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTSBP07858 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.05■□□□□ 0.96
CTSBP07858 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTSBP07858 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTSBP07858 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
CTSBP07858 AC026271.2-201ENST00000428091 497 ntBASIC21.05■□□□□ 0.96
CTSBP07858 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.05■□□□□ 0.96
CTSBP07858 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CTSBP07858 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTSBP07858 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTSBP07858 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTSBP07858 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTSBP07858 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CTSBP07858 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTSBP07858 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CTSBP07858 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.04■□□□□ 0.96
CTSBP07858 IRS3P-201ENST00000223076 1006 ntBASIC21.04■□□□□ 0.96
CTSBP07858 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTSBP07858 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.04■□□□□ 0.96
CTSBP07858 RARRES2P6-201ENST00000567333 442 ntBASIC21.04■□□□□ 0.96
CTSBP07858 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.04■□□□□ 0.96
CTSBP07858 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTSBP07858 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTSBP07858 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.04■□□□□ 0.96
CTSBP07858 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.04■□□□□ 0.96
CTSBP07858 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.03■□□□□ 0.96
CTSBP07858 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CTSBP07858 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.03■□□□□ 0.96
CTSBP07858 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms