Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
APOC1P02654 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
APOC1P02654 MIR4787-201ENST00000607364 84 ntBASIC19.47■□□□□ 0.71
APOC1P02654 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
APOC1P02654 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
APOC1P02654 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.47■□□□□ 0.71
APOC1P02654 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
APOC1P02654 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
APOC1P02654 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
APOC1P02654 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
APOC1P02654 AL121603.2-201ENST00000557373 2117 ntBASIC19.46■□□□□ 0.71
APOC1P02654 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
APOC1P02654 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.46■□□□□ 0.71
APOC1P02654 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
APOC1P02654 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
APOC1P02654 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
APOC1P02654 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
APOC1P02654 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
APOC1P02654 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
APOC1P02654 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
APOC1P02654 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.46■□□□□ 0.71
APOC1P02654 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.46■□□□□ 0.71
APOC1P02654 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
APOC1P02654 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
APOC1P02654 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
APOC1P02654 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
APOC1P02654 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
APOC1P02654 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
APOC1P02654 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
APOC1P02654 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
APOC1P02654 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.45■□□□□ 0.7
APOC1P02654 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.45■□□□□ 0.7
APOC1P02654 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.45■□□□□ 0.7
APOC1P02654 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
APOC1P02654 RARRES2P1-201ENST00000474487 481 ntBASIC19.45■□□□□ 0.7
APOC1P02654 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.45■□□□□ 0.7
APOC1P02654 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.45■□□□□ 0.7
APOC1P02654 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
APOC1P02654 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
APOC1P02654 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
APOC1P02654 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
APOC1P02654 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
APOC1P02654 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
APOC1P02654 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.44■□□□□ 0.7
APOC1P02654 LINC01529-204ENST00000636474 1715 ntBASIC19.44■□□□□ 0.7
APOC1P02654 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
APOC1P02654 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
APOC1P02654 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
APOC1P02654 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.44■□□□□ 0.7
APOC1P02654 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
APOC1P02654 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
APOC1P02654 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
APOC1P02654 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
APOC1P02654 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
APOC1P02654 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.43■□□□□ 0.7
APOC1P02654 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.43■□□□□ 0.7
APOC1P02654 AC239859.2-201ENST00000444165 318 ntBASIC19.43■□□□□ 0.7
APOC1P02654 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.43■□□□□ 0.7
APOC1P02654 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.43■□□□□ 0.7
APOC1P02654 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.43■□□□□ 0.7
APOC1P02654 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
APOC1P02654 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
APOC1P02654 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
APOC1P02654 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.42■□□□□ 0.7
APOC1P02654 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.42■□□□□ 0.7
APOC1P02654 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.42■□□□□ 0.7
APOC1P02654 AC233723.2-201ENST00000623798 2106 ntBASIC19.42■□□□□ 0.7
APOC1P02654 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
APOC1P02654 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
APOC1P02654 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
APOC1P02654 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.42■□□□□ 0.7
APOC1P02654 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.42■□□□□ 0.7
APOC1P02654 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
APOC1P02654 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
APOC1P02654 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.42■□□□□ 0.7
APOC1P02654 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
APOC1P02654 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
APOC1P02654 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
APOC1P02654 AL117328.2-201ENST00000624617 1940 ntBASIC19.41■□□□□ 0.7
APOC1P02654 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
APOC1P02654 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.41■□□□□ 0.7
APOC1P02654 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
APOC1P02654 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
APOC1P02654 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.41■□□□□ 0.7
APOC1P02654 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
APOC1P02654 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.41■□□□□ 0.7
APOC1P02654 AC010997.5-201ENST00000609182 354 ntBASIC19.41■□□□□ 0.7
APOC1P02654 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
APOC1P02654 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
APOC1P02654 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
APOC1P02654 SLC25A24-204ENST00000569674 2357 ntBASIC19.41■□□□□ 0.7
APOC1P02654 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
APOC1P02654 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
APOC1P02654 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
APOC1P02654 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
APOC1P02654 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
APOC1P02654 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
APOC1P02654 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.4■□□□□ 0.7
APOC1P02654 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
APOC1P02654 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms