Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
KRT6AP02538 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.4■■□□□ 1.02
KRT6AP02538 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
KRT6AP02538 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
KRT6AP02538 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
KRT6AP02538 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.39■■□□□ 1.02
KRT6AP02538 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
KRT6AP02538 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
KRT6AP02538 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.39■■□□□ 1.01
KRT6AP02538 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.39■■□□□ 1.01
KRT6AP02538 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
KRT6AP02538 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
KRT6AP02538 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
KRT6AP02538 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.39■■□□□ 1.01
KRT6AP02538 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
KRT6AP02538 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
KRT6AP02538 AC127496.7-201ENST00000625110 1798 ntBASIC21.38■■□□□ 1.01
KRT6AP02538 EP400NL-214ENST00000641289 2402 ntBASIC21.38■■□□□ 1.01
KRT6AP02538 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
KRT6AP02538 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.38■■□□□ 1.01
KRT6AP02538 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
KRT6AP02538 TSPY9P-201ENST00000440215 945 ntBASIC21.38■■□□□ 1.01
KRT6AP02538 TSPY11P-201ENST00000442607 1045 ntBASIC21.38■■□□□ 1.01
KRT6AP02538 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
KRT6AP02538 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
KRT6AP02538 LINC00526-201ENST00000581067 1875 ntBASIC21.38■■□□□ 1.01
KRT6AP02538 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
KRT6AP02538 AC242852.2-201ENST00000615738 1807 ntBASIC21.38■■□□□ 1.01
KRT6AP02538 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
KRT6AP02538 PKD1P6-201ENST00000343738 4769 ntBASIC21.38■■□□□ 1.01
KRT6AP02538 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
KRT6AP02538 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
KRT6AP02538 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
KRT6AP02538 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
KRT6AP02538 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
KRT6AP02538 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.37■■□□□ 1.01
KRT6AP02538 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
KRT6AP02538 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.37■■□□□ 1.01
KRT6AP02538 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
KRT6AP02538 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
KRT6AP02538 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
KRT6AP02538 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
KRT6AP02538 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.37■■□□□ 1.01
KRT6AP02538 DUX4L4-201ENST00000566884 1269 ntBASIC21.37■■□□□ 1.01
KRT6AP02538 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
KRT6AP02538 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
KRT6AP02538 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
KRT6AP02538 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
KRT6AP02538 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
KRT6AP02538 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.37■■□□□ 1.01
KRT6AP02538 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
KRT6AP02538 AC009102.2-201ENST00000606772 1639 ntBASIC21.37■■□□□ 1.01
KRT6AP02538 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
KRT6AP02538 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
KRT6AP02538 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
KRT6AP02538 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
KRT6AP02538 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
KRT6AP02538 AL451085.2-201ENST00000605085 799 ntBASIC21.36■■□□□ 1.01
KRT6AP02538 AC009086.3-201ENST00000623486 1008 ntBASIC21.36■■□□□ 1.01
KRT6AP02538 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
KRT6AP02538 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KRT6AP02538 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KRT6AP02538 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.36■■□□□ 1.01
KRT6AP02538 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
KRT6AP02538 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
KRT6AP02538 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
KRT6AP02538 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
KRT6AP02538 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
KRT6AP02538 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
KRT6AP02538 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
KRT6AP02538 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
KRT6AP02538 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
KRT6AP02538 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
KRT6AP02538 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.34■■□□□ 1.01
KRT6AP02538 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
KRT6AP02538 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
KRT6AP02538 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
KRT6AP02538 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.34■■□□□ 1.01
KRT6AP02538 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.34■■□□□ 1.01
KRT6AP02538 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
KRT6AP02538 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
KRT6AP02538 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
KRT6AP02538 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
KRT6AP02538 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
KRT6AP02538 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.33■■□□□ 1.01
KRT6AP02538 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.33■■□□□ 1.01
KRT6AP02538 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.33■■□□□ 1.01
KRT6AP02538 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
KRT6AP02538 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.33■■□□□ 1
KRT6AP02538 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
KRT6AP02538 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.33■■□□□ 1
KRT6AP02538 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
KRT6AP02538 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.33■■□□□ 1
KRT6AP02538 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1
KRT6AP02538 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
KRT6AP02538 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
KRT6AP02538 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
KRT6AP02538 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
KRT6AP02538 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.32■■□□□ 1
KRT6AP02538 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms