Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
TRBC1P01850 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC22.24■■□□□ 1.15
TRBC1P01850 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC22.24■■□□□ 1.15
TRBC1P01850 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC22.24■■□□□ 1.15
TRBC1P01850 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC22.24■■□□□ 1.15
TRBC1P01850 MIR4767-201ENST00000582827 78 ntBASIC22.24■■□□□ 1.15
TRBC1P01850 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC22.24■■□□□ 1.15
TRBC1P01850 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC22.24■■□□□ 1.15
TRBC1P01850 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TRBC1P01850 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TRBC1P01850 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TRBC1P01850 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
TRBC1P01850 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC22.23■■□□□ 1.15
TRBC1P01850 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
TRBC1P01850 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
TRBC1P01850 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TRBC1P01850 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC22.23■■□□□ 1.15
TRBC1P01850 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
TRBC1P01850 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC22.23■■□□□ 1.15
TRBC1P01850 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC22.23■■□□□ 1.15
TRBC1P01850 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
TRBC1P01850 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
TRBC1P01850 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC22.22■■□□□ 1.15
TRBC1P01850 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC22.22■■□□□ 1.15
TRBC1P01850 AC133561.4-201ENST00000566112 224 ntBASIC22.22■■□□□ 1.15
TRBC1P01850 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC22.22■■□□□ 1.15
TRBC1P01850 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC22.22■■□□□ 1.15
TRBC1P01850 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
TRBC1P01850 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
TRBC1P01850 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC22.21■■□□□ 1.15
TRBC1P01850 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC22.21■■□□□ 1.15
TRBC1P01850 AC004687.1-201ENST00000579003 1625 ntBASIC22.21■■□□□ 1.15
TRBC1P01850 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
TRBC1P01850 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TRBC1P01850 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TRBC1P01850 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC22.21■■□□□ 1.15
TRBC1P01850 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TRBC1P01850 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.15
TRBC1P01850 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC22.2■■□□□ 1.14
TRBC1P01850 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TRBC1P01850 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC22.2■■□□□ 1.14
TRBC1P01850 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
TRBC1P01850 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
TRBC1P01850 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC22.2■■□□□ 1.14
TRBC1P01850 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC22.2■■□□□ 1.14
TRBC1P01850 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
TRBC1P01850 RARA-203ENST00000394086 2008 ntTSL 2 BASIC22.19■■□□□ 1.14
TRBC1P01850 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC22.19■■□□□ 1.14
TRBC1P01850 EDA-201ENST00000338901 1233 ntBASIC22.19■■□□□ 1.14
TRBC1P01850 MIR638-201ENST00000385237 100 ntBASIC22.19■■□□□ 1.14
TRBC1P01850 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TRBC1P01850 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
TRBC1P01850 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
TRBC1P01850 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
TRBC1P01850 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
TRBC1P01850 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TRBC1P01850 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
TRBC1P01850 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
TRBC1P01850 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
TRBC1P01850 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
TRBC1P01850 AL031432.3-201ENST00000607698 485 ntBASIC22.18■■□□□ 1.14
TRBC1P01850 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC22.18■■□□□ 1.14
TRBC1P01850 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC22.18■■□□□ 1.14
TRBC1P01850 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC22.18■■□□□ 1.14
TRBC1P01850 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC22.18■■□□□ 1.14
TRBC1P01850 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TRBC1P01850 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC22.18■■□□□ 1.14
TRBC1P01850 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC22.17■■□□□ 1.14
TRBC1P01850 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC22.17■■□□□ 1.14
TRBC1P01850 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TRBC1P01850 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC22.17■■□□□ 1.14
TRBC1P01850 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TRBC1P01850 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC22.17■■□□□ 1.14
TRBC1P01850 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TRBC1P01850 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC22.17■■□□□ 1.14
TRBC1P01850 SNX3-202ENST00000349379 890 ntTSL 2 BASIC22.17■■□□□ 1.14
TRBC1P01850 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
TRBC1P01850 OR2I1P-207ENST00000453522 948 ntBASIC22.17■■□□□ 1.14
TRBC1P01850 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC22.17■■□□□ 1.14
TRBC1P01850 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC22.17■■□□□ 1.14
TRBC1P01850 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TRBC1P01850 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC22.16■■□□□ 1.14
TRBC1P01850 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC22.16■■□□□ 1.14
TRBC1P01850 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
TRBC1P01850 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC22.16■■□□□ 1.14
TRBC1P01850 GRAMD4P4-201ENST00000613563 1115 ntBASIC22.16■■□□□ 1.14
TRBC1P01850 AL355001.2-201ENST00000620617 1191 ntBASIC22.16■■□□□ 1.14
TRBC1P01850 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
TRBC1P01850 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
TRBC1P01850 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TRBC1P01850 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC22.16■■□□□ 1.14
TRBC1P01850 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TRBC1P01850 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC22.16■■□□□ 1.14
TRBC1P01850 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TRBC1P01850 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
TRBC1P01850 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
TRBC1P01850 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
TRBC1P01850 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
TRBC1P01850 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
TRBC1P01850 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms