Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV12-3P01733 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV12-3P01733 DUX4L19-201ENST00000557448 1267 ntBASIC17.12■□□□□ 0.33
TRBV12-3P01733 AL499627.2-201ENST00000606283 725 ntBASIC17.12■□□□□ 0.33
TRBV12-3P01733 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC17.12■□□□□ 0.33
TRBV12-3P01733 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC17.12■□□□□ 0.33
TRBV12-3P01733 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV12-3P01733 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV12-3P01733 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC17.12■□□□□ 0.33
TRBV12-3P01733 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC17.12■□□□□ 0.33
TRBV12-3P01733 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV12-3P01733 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC17.11■□□□□ 0.33
TRBV12-3P01733 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV12-3P01733 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV12-3P01733 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC17.11■□□□□ 0.33
TRBV12-3P01733 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV12-3P01733 MTURN-203ENST00000409688 843 ntTSL 2 BASIC17.11■□□□□ 0.33
TRBV12-3P01733 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV12-3P01733 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TRBV12-3P01733 AL136162.1-201ENST00000607711 1078 ntBASIC17.11■□□□□ 0.33
TRBV12-3P01733 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TRBV12-3P01733 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TRBV12-3P01733 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
TRBV12-3P01733 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TRBV12-3P01733 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC17.11■□□□□ 0.33
TRBV12-3P01733 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV12-3P01733 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV12-3P01733 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV12-3P01733 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
TRBV12-3P01733 AC133637.1-201ENST00000624115 1537 ntBASIC17.11■□□□□ 0.33
TRBV12-3P01733 COMT-203ENST00000403184 2217 ntTSL 2 BASIC17.11■□□□□ 0.33
TRBV12-3P01733 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
TRBV12-3P01733 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TRBV12-3P01733 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
TRBV12-3P01733 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV12-3P01733 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV12-3P01733 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV12-3P01733 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TRBV12-3P01733 AC024257.2-201ENST00000549699 147 ntBASIC17.1■□□□□ 0.33
TRBV12-3P01733 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV12-3P01733 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC17.1■□□□□ 0.33
TRBV12-3P01733 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV12-3P01733 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV12-3P01733 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV12-3P01733 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV12-3P01733 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV12-3P01733 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TRBV12-3P01733 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV12-3P01733 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV12-3P01733 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV12-3P01733 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC17.09■□□□□ 0.33
TRBV12-3P01733 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC17.09■□□□□ 0.33
TRBV12-3P01733 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC17.09■□□□□ 0.33
TRBV12-3P01733 HES6-206ENST00000409574 738 ntTSL 2 BASIC17.09■□□□□ 0.33
TRBV12-3P01733 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC17.09■□□□□ 0.33
TRBV12-3P01733 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC17.09■□□□□ 0.33
TRBV12-3P01733 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV12-3P01733 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TRBV12-3P01733 SF1-220ENST00000626028 704 ntTSL 2 BASIC17.09■□□□□ 0.33
TRBV12-3P01733 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV12-3P01733 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TRBV12-3P01733 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV12-3P01733 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV12-3P01733 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
TRBV12-3P01733 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
TRBV12-3P01733 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
TRBV12-3P01733 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC17.08■□□□□ 0.33
TRBV12-3P01733 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC17.08■□□□□ 0.33
TRBV12-3P01733 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRBV12-3P01733 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRBV12-3P01733 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
TRBV12-3P01733 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC17.08■□□□□ 0.33
TRBV12-3P01733 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC17.08■□□□□ 0.33
TRBV12-3P01733 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV12-3P01733 AC135279.3-201ENST00000610945 1311 ntBASIC17.08■□□□□ 0.32
TRBV12-3P01733 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
TRBV12-3P01733 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV12-3P01733 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV12-3P01733 PTMA-205ENST00000410064 814 ntTSL 2 BASIC17.08■□□□□ 0.32
TRBV12-3P01733 PBX2P1-201ENST00000493219 1291 ntBASIC17.08■□□□□ 0.32
TRBV12-3P01733 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.32
TRBV12-3P01733 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC17.08■□□□□ 0.32
TRBV12-3P01733 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV12-3P01733 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV12-3P01733 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC17.08■□□□□ 0.32
TRBV12-3P01733 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV12-3P01733 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC17.07■□□□□ 0.32
TRBV12-3P01733 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV12-3P01733 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV12-3P01733 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC17.07■□□□□ 0.32
TRBV12-3P01733 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV12-3P01733 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TRBV12-3P01733 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV12-3P01733 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC17.07■□□□□ 0.32
TRBV12-3P01733 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TRBV12-3P01733 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC17.07■□□□□ 0.32
TRBV12-3P01733 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC17.07■□□□□ 0.32
TRBV12-3P01733 MIR4767-201ENST00000582827 78 ntBASIC17.07■□□□□ 0.32
TRBV12-3P01733 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC17.07■□□□□ 0.32
TRBV12-3P01733 AL138724.1-201ENST00000606771 1088 ntBASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms