Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.29■■□□□ 1
CNOT3O75175 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.29■■□□□ 1
CNOT3O75175 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
CNOT3O75175 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.29■■□□□ 1
CNOT3O75175 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.29■■□□□ 1
CNOT3O75175 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.29■■□□□ 1
CNOT3O75175 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.29■■□□□ 1
CNOT3O75175 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CNOT3O75175 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CNOT3O75175 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CNOT3O75175 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
CNOT3O75175 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CNOT3O75175 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.28■■□□□ 1
CNOT3O75175 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CNOT3O75175 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CNOT3O75175 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CNOT3O75175 MIR4767-201ENST00000582827 78 ntBASIC21.28■■□□□ 1
CNOT3O75175 AC092171.4-201ENST00000609130 632 ntBASIC21.28■■□□□ 1
CNOT3O75175 AL355001.2-201ENST00000620617 1191 ntBASIC21.28■■□□□ 1
CNOT3O75175 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.28■■□□□ 1
CNOT3O75175 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CNOT3O75175 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CNOT3O75175 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CNOT3O75175 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
CNOT3O75175 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.28■■□□□ 1
CNOT3O75175 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.27■■□□□ 1
CNOT3O75175 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.27■■□□□ 1
CNOT3O75175 AF213884.3-201ENST00000563833 479 ntBASIC21.27■■□□□ 1
CNOT3O75175 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.27■■□□□ 1
CNOT3O75175 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CNOT3O75175 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.27■■□□□ 1
CNOT3O75175 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CNOT3O75175 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CNOT3O75175 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.26■□□□□ 0.99
CNOT3O75175 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CNOT3O75175 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CNOT3O75175 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.26■□□□□ 0.99
CNOT3O75175 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.26■□□□□ 0.99
CNOT3O75175 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
CNOT3O75175 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
CNOT3O75175 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.26■□□□□ 0.99
CNOT3O75175 AP001330.3-201ENST00000520123 633 ntBASIC21.26■□□□□ 0.99
CNOT3O75175 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.26■□□□□ 0.99
CNOT3O75175 AL136967.2-201ENST00000623968 743 ntBASIC21.26■□□□□ 0.99
CNOT3O75175 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CNOT3O75175 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CNOT3O75175 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CNOT3O75175 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.25■□□□□ 0.99
CNOT3O75175 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
CNOT3O75175 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.25■□□□□ 0.99
CNOT3O75175 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CNOT3O75175 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
CNOT3O75175 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CNOT3O75175 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.25■□□□□ 0.99
CNOT3O75175 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.25■□□□□ 0.99
CNOT3O75175 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.25■□□□□ 0.99
CNOT3O75175 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CNOT3O75175 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CNOT3O75175 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CNOT3O75175 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CNOT3O75175 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CNOT3O75175 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.25■□□□□ 0.99
CNOT3O75175 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CNOT3O75175 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CNOT3O75175 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.25■□□□□ 0.99
CNOT3O75175 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CNOT3O75175 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CNOT3O75175 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CNOT3O75175 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CNOT3O75175 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CNOT3O75175 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CNOT3O75175 MIR939-201ENST00000401314 82 ntBASIC21.24■□□□□ 0.99
CNOT3O75175 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CNOT3O75175 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CNOT3O75175 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CNOT3O75175 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CNOT3O75175 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.23■□□□□ 0.99
CNOT3O75175 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.23■□□□□ 0.99
CNOT3O75175 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CNOT3O75175 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CNOT3O75175 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CNOT3O75175 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.23■□□□□ 0.99
CNOT3O75175 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.23■□□□□ 0.99
CNOT3O75175 AC241377.3-202ENST00000626088 1088 ntBASIC21.23■□□□□ 0.99
CNOT3O75175 AC241585.3-202ENST00000628937 1088 ntBASIC21.23■□□□□ 0.99
CNOT3O75175 AC245100.8-202ENST00000629247 1058 ntBASIC21.23■□□□□ 0.99
CNOT3O75175 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CNOT3O75175 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CNOT3O75175 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.23■□□□□ 0.99
CNOT3O75175 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
CNOT3O75175 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.23■□□□□ 0.99
CNOT3O75175 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CNOT3O75175 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CNOT3O75175 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
CNOT3O75175 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.22■□□□□ 0.99
CNOT3O75175 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CNOT3O75175 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CNOT3O75175 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.22■□□□□ 0.99
CNOT3O75175 AC011298.3-201ENST00000615796 283 ntBASIC21.22■□□□□ 0.99
CNOT3O75175 AC009086.3-201ENST00000623486 1008 ntBASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms