Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
BRD4O60885 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
BRD4O60885 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC30.78■■■□□ 2.52
BRD4O60885 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC30.78■■■□□ 2.52
BRD4O60885 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
BRD4O60885 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC30.78■■■□□ 2.52
BRD4O60885 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC30.78■■■□□ 2.52
BRD4O60885 AC012414.1-201ENST00000556676 535 ntBASIC30.78■■■□□ 2.52
BRD4O60885 AL354811.1-201ENST00000610286 706 ntBASIC30.78■■■□□ 2.52
BRD4O60885 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC30.77■■■□□ 2.52
BRD4O60885 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
BRD4O60885 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC30.77■■■□□ 2.52
BRD4O60885 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC30.77■■■□□ 2.52
BRD4O60885 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
BRD4O60885 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC30.77■■■□□ 2.52
BRD4O60885 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC30.76■■■□□ 2.51
BRD4O60885 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC30.76■■■□□ 2.51
BRD4O60885 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC30.76■■■□□ 2.51
BRD4O60885 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
BRD4O60885 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC30.76■■■□□ 2.51
BRD4O60885 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC30.76■■■□□ 2.51
BRD4O60885 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC30.76■■■□□ 2.51
BRD4O60885 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC30.76■■■□□ 2.51
BRD4O60885 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC30.76■■■□□ 2.51
BRD4O60885 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
BRD4O60885 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC30.76■■■□□ 2.51
BRD4O60885 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC30.75■■■□□ 2.51
BRD4O60885 AC133637.1-201ENST00000624115 1537 ntBASIC30.75■■■□□ 2.51
BRD4O60885 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
BRD4O60885 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC30.75■■■□□ 2.51
BRD4O60885 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC30.75■■■□□ 2.51
BRD4O60885 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC30.75■■■□□ 2.51
BRD4O60885 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
BRD4O60885 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC30.75■■■□□ 2.51
BRD4O60885 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC30.75■■■□□ 2.51
BRD4O60885 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC30.75■■■□□ 2.51
BRD4O60885 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC30.75■■■□□ 2.51
BRD4O60885 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC30.75■■■□□ 2.51
BRD4O60885 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
BRD4O60885 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
BRD4O60885 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC30.74■■■□□ 2.51
BRD4O60885 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
BRD4O60885 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC30.74■■■□□ 2.51
BRD4O60885 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
BRD4O60885 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
BRD4O60885 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC30.74■■■□□ 2.51
BRD4O60885 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC30.74■■■□□ 2.51
BRD4O60885 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
BRD4O60885 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC30.74■■■□□ 2.51
BRD4O60885 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC30.74■■■□□ 2.51
BRD4O60885 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC30.73■■■□□ 2.51
BRD4O60885 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC30.73■■■□□ 2.51
BRD4O60885 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC30.73■■■□□ 2.51
BRD4O60885 DUSP8P5-201ENST00000422884 1815 ntBASIC30.73■■■□□ 2.51
BRD4O60885 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC30.73■■■□□ 2.51
BRD4O60885 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
BRD4O60885 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC30.73■■■□□ 2.51
BRD4O60885 FP325331.1-202ENST00000623531 1380 ntBASIC30.73■■■□□ 2.51
BRD4O60885 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
BRD4O60885 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC30.73■■■□□ 2.51
BRD4O60885 AC022517.1-201ENST00000592429 346 ntBASIC30.73■■■□□ 2.51
BRD4O60885 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
BRD4O60885 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
BRD4O60885 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
BRD4O60885 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
BRD4O60885 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC30.72■■■□□ 2.51
BRD4O60885 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
BRD4O60885 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC30.72■■■□□ 2.51
BRD4O60885 RARRES2P11-201ENST00000635158 484 ntBASIC30.72■■■□□ 2.51
BRD4O60885 CASK-201ENST00000378154 2494 ntTSL 5 BASIC30.72■■■□□ 2.51
BRD4O60885 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC30.72■■■□□ 2.51
BRD4O60885 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
BRD4O60885 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC30.71■■■□□ 2.51
BRD4O60885 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
BRD4O60885 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC30.71■■■□□ 2.51
BRD4O60885 DUX4L4-201ENST00000566884 1269 ntBASIC30.71■■■□□ 2.51
BRD4O60885 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC30.71■■■□□ 2.51
BRD4O60885 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC30.7■■■□□ 2.51
BRD4O60885 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
BRD4O60885 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC30.7■■■□□ 2.51
BRD4O60885 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC30.7■■■□□ 2.51
BRD4O60885 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC30.7■■■□□ 2.51
BRD4O60885 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC30.7■■■□□ 2.51
BRD4O60885 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC30.7■■■□□ 2.51
BRD4O60885 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC30.7■■■□□ 2.51
BRD4O60885 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
BRD4O60885 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC30.7■■■□□ 2.51
BRD4O60885 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC30.7■■■□□ 2.51
BRD4O60885 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC30.7■■■□□ 2.51
BRD4O60885 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
BRD4O60885 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC30.7■■■□□ 2.51
BRD4O60885 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC30.7■■■□□ 2.5
BRD4O60885 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC30.7■■■□□ 2.5
BRD4O60885 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
BRD4O60885 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
BRD4O60885 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC30.69■■■□□ 2.5
BRD4O60885 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
BRD4O60885 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC30.69■■■□□ 2.5
BRD4O60885 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC30.69■■■□□ 2.5
BRD4O60885 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms