Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
LCMT2O60294 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
LCMT2O60294 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
LCMT2O60294 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LCMT2O60294 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
LCMT2O60294 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.22■□□□□ 0.99
LCMT2O60294 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
LCMT2O60294 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LCMT2O60294 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LCMT2O60294 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
LCMT2O60294 AC004687.1-201ENST00000579003 1625 ntBASIC21.22■□□□□ 0.99
LCMT2O60294 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.22■□□□□ 0.99
LCMT2O60294 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LCMT2O60294 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
LCMT2O60294 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
LCMT2O60294 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LCMT2O60294 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LCMT2O60294 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.21■□□□□ 0.99
LCMT2O60294 AC133637.1-201ENST00000624115 1537 ntBASIC21.21■□□□□ 0.99
LCMT2O60294 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LCMT2O60294 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LCMT2O60294 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
LCMT2O60294 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
LCMT2O60294 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.21■□□□□ 0.99
LCMT2O60294 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.21■□□□□ 0.99
LCMT2O60294 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.2■□□□□ 0.98
LCMT2O60294 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LCMT2O60294 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.2■□□□□ 0.98
LCMT2O60294 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
LCMT2O60294 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.2■□□□□ 0.98
LCMT2O60294 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.2■□□□□ 0.98
LCMT2O60294 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.2■□□□□ 0.98
LCMT2O60294 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LCMT2O60294 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.19■□□□□ 0.98
LCMT2O60294 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LCMT2O60294 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
LCMT2O60294 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.19■□□□□ 0.98
LCMT2O60294 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.19■□□□□ 0.98
LCMT2O60294 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LCMT2O60294 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
LCMT2O60294 AC110285.6-201ENST00000617652 491 ntBASIC21.19■□□□□ 0.98
LCMT2O60294 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.19■□□□□ 0.98
LCMT2O60294 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.19■□□□□ 0.98
LCMT2O60294 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LCMT2O60294 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LCMT2O60294 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.19■□□□□ 0.98
LCMT2O60294 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
LCMT2O60294 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LCMT2O60294 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LCMT2O60294 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LCMT2O60294 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
LCMT2O60294 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
LCMT2O60294 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LCMT2O60294 AC024257.2-201ENST00000549699 147 ntBASIC21.18■□□□□ 0.98
LCMT2O60294 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
LCMT2O60294 AL138724.1-201ENST00000606771 1088 ntBASIC21.18■□□□□ 0.98
LCMT2O60294 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
LCMT2O60294 AL136162.1-201ENST00000607711 1078 ntBASIC21.18■□□□□ 0.98
LCMT2O60294 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
LCMT2O60294 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.18■□□□□ 0.98
LCMT2O60294 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
LCMT2O60294 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.18■□□□□ 0.98
LCMT2O60294 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.17■□□□□ 0.98
LCMT2O60294 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LCMT2O60294 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.17■□□□□ 0.98
LCMT2O60294 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.17■□□□□ 0.98
LCMT2O60294 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.17■□□□□ 0.98
LCMT2O60294 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LCMT2O60294 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LCMT2O60294 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LCMT2O60294 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LCMT2O60294 AC068473.5-201ENST00000616428 2072 ntBASIC21.17■□□□□ 0.98
LCMT2O60294 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
LCMT2O60294 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
LCMT2O60294 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.17■□□□□ 0.98
LCMT2O60294 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LCMT2O60294 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
LCMT2O60294 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LCMT2O60294 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LCMT2O60294 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LCMT2O60294 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.16■□□□□ 0.98
LCMT2O60294 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
LCMT2O60294 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.16■□□□□ 0.98
LCMT2O60294 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
LCMT2O60294 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.16■□□□□ 0.98
LCMT2O60294 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.16■□□□□ 0.98
LCMT2O60294 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.16■□□□□ 0.98
LCMT2O60294 AC011298.3-201ENST00000615796 283 ntBASIC21.16■□□□□ 0.98
LCMT2O60294 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LCMT2O60294 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
LCMT2O60294 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LCMT2O60294 C1orf229-201ENST00000623686 2258 ntBASIC21.16■□□□□ 0.98
LCMT2O60294 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
LCMT2O60294 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
LCMT2O60294 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
LCMT2O60294 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LCMT2O60294 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
LCMT2O60294 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LCMT2O60294 PBX2P1-201ENST00000493219 1291 ntBASIC21.15■□□□□ 0.98
LCMT2O60294 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms