Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PCDH7O60245 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDH7O60245 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
PCDH7O60245 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.13■□□□□ 0.97
PCDH7O60245 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDH7O60245 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.13■□□□□ 0.97
PCDH7O60245 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDH7O60245 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.13■□□□□ 0.97
PCDH7O60245 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
PCDH7O60245 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
PCDH7O60245 C17orf82-201ENST00000623772 1530 ntBASIC21.13■□□□□ 0.97
PCDH7O60245 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDH7O60245 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDH7O60245 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDH7O60245 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.12■□□□□ 0.97
PCDH7O60245 AC009086.3-201ENST00000623486 1008 ntBASIC21.12■□□□□ 0.97
PCDH7O60245 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDH7O60245 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDH7O60245 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDH7O60245 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDH7O60245 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.11■□□□□ 0.97
PCDH7O60245 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDH7O60245 GUSBP5-201ENST00000418136 578 ntBASIC21.11■□□□□ 0.97
PCDH7O60245 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PCDH7O60245 EP400NL-214ENST00000641289 2402 ntBASIC21.11■□□□□ 0.97
PCDH7O60245 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDH7O60245 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDH7O60245 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDH7O60245 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.11■□□□□ 0.97
PCDH7O60245 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PCDH7O60245 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PCDH7O60245 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDH7O60245 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDH7O60245 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDH7O60245 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.1■□□□□ 0.97
PCDH7O60245 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.1■□□□□ 0.97
PCDH7O60245 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.1■□□□□ 0.97
PCDH7O60245 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.1■□□□□ 0.97
PCDH7O60245 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDH7O60245 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.1■□□□□ 0.97
PCDH7O60245 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.1■□□□□ 0.97
PCDH7O60245 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDH7O60245 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDH7O60245 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.1■□□□□ 0.97
PCDH7O60245 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
PCDH7O60245 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
PCDH7O60245 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PCDH7O60245 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.09■□□□□ 0.97
PCDH7O60245 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PCDH7O60245 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.09■□□□□ 0.97
PCDH7O60245 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDH7O60245 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDH7O60245 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
PCDH7O60245 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDH7O60245 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDH7O60245 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDH7O60245 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDH7O60245 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.09■□□□□ 0.97
PCDH7O60245 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.09■□□□□ 0.97
PCDH7O60245 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
PCDH7O60245 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDH7O60245 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDH7O60245 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDH7O60245 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
PCDH7O60245 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.08■□□□□ 0.97
PCDH7O60245 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PCDH7O60245 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.08■□□□□ 0.97
PCDH7O60245 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
PCDH7O60245 AL117332.1-201ENST00000622628 974 ntBASIC21.08■□□□□ 0.97
PCDH7O60245 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
PCDH7O60245 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
PCDH7O60245 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.08■□□□□ 0.96
PCDH7O60245 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
PCDH7O60245 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PCDH7O60245 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
PCDH7O60245 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
PCDH7O60245 AC127496.7-201ENST00000625110 1798 ntBASIC21.08■□□□□ 0.96
PCDH7O60245 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.07■□□□□ 0.96
PCDH7O60245 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
PCDH7O60245 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.07■□□□□ 0.96
PCDH7O60245 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.07■□□□□ 0.96
PCDH7O60245 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
PCDH7O60245 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PCDH7O60245 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.07■□□□□ 0.96
PCDH7O60245 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDH7O60245 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
PCDH7O60245 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDH7O60245 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDH7O60245 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.06■□□□□ 0.96
PCDH7O60245 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.06■□□□□ 0.96
PCDH7O60245 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PCDH7O60245 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PCDH7O60245 ECEL1P1-201ENST00000373592 1742 ntBASIC21.06■□□□□ 0.96
PCDH7O60245 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.06■□□□□ 0.96
PCDH7O60245 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
PCDH7O60245 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDH7O60245 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDH7O60245 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PCDH7O60245 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDH7O60245 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms