Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
IDH3BO43837 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.19■□□□□ 0.82
IDH3BO43837 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
IDH3BO43837 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
IDH3BO43837 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
IDH3BO43837 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
IDH3BO43837 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.18■□□□□ 0.82
IDH3BO43837 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.18■□□□□ 0.82
IDH3BO43837 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
IDH3BO43837 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.18■□□□□ 0.82
IDH3BO43837 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
IDH3BO43837 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
IDH3BO43837 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.18■□□□□ 0.82
IDH3BO43837 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.18■□□□□ 0.82
IDH3BO43837 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
IDH3BO43837 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
IDH3BO43837 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
IDH3BO43837 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
IDH3BO43837 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
IDH3BO43837 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.18■□□□□ 0.82
IDH3BO43837 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
IDH3BO43837 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
IDH3BO43837 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.17■□□□□ 0.82
IDH3BO43837 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
IDH3BO43837 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
IDH3BO43837 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
IDH3BO43837 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.17■□□□□ 0.82
IDH3BO43837 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.17■□□□□ 0.82
IDH3BO43837 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
IDH3BO43837 AC079630.1-202ENST00000618127 1840 ntBASIC20.17■□□□□ 0.82
IDH3BO43837 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
IDH3BO43837 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
IDH3BO43837 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
IDH3BO43837 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
IDH3BO43837 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
IDH3BO43837 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
IDH3BO43837 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
IDH3BO43837 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
IDH3BO43837 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
IDH3BO43837 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
IDH3BO43837 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
IDH3BO43837 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
IDH3BO43837 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
IDH3BO43837 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
IDH3BO43837 AC012354.3-201ENST00000623734 483 ntBASIC20.16■□□□□ 0.82
IDH3BO43837 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
IDH3BO43837 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
IDH3BO43837 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.16■□□□□ 0.82
IDH3BO43837 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
IDH3BO43837 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
IDH3BO43837 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
IDH3BO43837 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.15■□□□□ 0.82
IDH3BO43837 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
IDH3BO43837 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
IDH3BO43837 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
IDH3BO43837 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
IDH3BO43837 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.15■□□□□ 0.82
IDH3BO43837 ESRRAP2-201ENST00000418437 1549 ntBASIC20.15■□□□□ 0.82
IDH3BO43837 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
IDH3BO43837 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
IDH3BO43837 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.15■□□□□ 0.82
IDH3BO43837 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
IDH3BO43837 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
IDH3BO43837 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
IDH3BO43837 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
IDH3BO43837 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
IDH3BO43837 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
IDH3BO43837 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.14■□□□□ 0.81
IDH3BO43837 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.14■□□□□ 0.81
IDH3BO43837 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.14■□□□□ 0.81
IDH3BO43837 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
IDH3BO43837 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
IDH3BO43837 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
IDH3BO43837 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
IDH3BO43837 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
IDH3BO43837 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
IDH3BO43837 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
IDH3BO43837 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.14■□□□□ 0.81
IDH3BO43837 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
IDH3BO43837 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
IDH3BO43837 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
IDH3BO43837 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
IDH3BO43837 AC127496.7-201ENST00000625110 1798 ntBASIC20.13■□□□□ 0.81
IDH3BO43837 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
IDH3BO43837 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
IDH3BO43837 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
IDH3BO43837 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
IDH3BO43837 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
IDH3BO43837 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.13■□□□□ 0.81
IDH3BO43837 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.13■□□□□ 0.81
IDH3BO43837 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.13■□□□□ 0.81
IDH3BO43837 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
IDH3BO43837 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
IDH3BO43837 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
IDH3BO43837 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
IDH3BO43837 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.12■□□□□ 0.81
IDH3BO43837 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
IDH3BO43837 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
IDH3BO43837 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
IDH3BO43837 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms