Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC24.69■■□□□ 1.54
TNRC18O15417 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
TNRC18O15417 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
TNRC18O15417 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC24.69■■□□□ 1.54
TNRC18O15417 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC24.69■■□□□ 1.54
TNRC18O15417 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC24.69■■□□□ 1.54
TNRC18O15417 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
TNRC18O15417 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC24.69■■□□□ 1.54
TNRC18O15417 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
TNRC18O15417 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC24.69■■□□□ 1.54
TNRC18O15417 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
TNRC18O15417 OR2I1P-207ENST00000453522 948 ntBASIC24.68■■□□□ 1.54
TNRC18O15417 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC24.68■■□□□ 1.54
TNRC18O15417 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC24.68■■□□□ 1.54
TNRC18O15417 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
TNRC18O15417 PEX7-202ENST00000367756 680 ntTSL 3 BASIC24.68■■□□□ 1.54
TNRC18O15417 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
TNRC18O15417 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC24.68■■□□□ 1.54
TNRC18O15417 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
TNRC18O15417 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC24.67■■□□□ 1.54
TNRC18O15417 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC24.67■■□□□ 1.54
TNRC18O15417 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC24.67■■□□□ 1.54
TNRC18O15417 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
TNRC18O15417 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC24.67■■□□□ 1.54
TNRC18O15417 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC24.66■■□□□ 1.54
TNRC18O15417 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC24.66■■□□□ 1.54
TNRC18O15417 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TNRC18O15417 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC24.66■■□□□ 1.54
TNRC18O15417 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
TNRC18O15417 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
TNRC18O15417 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
TNRC18O15417 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
TNRC18O15417 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TNRC18O15417 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
TNRC18O15417 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC24.66■■□□□ 1.54
TNRC18O15417 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
TNRC18O15417 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC24.65■■□□□ 1.54
TNRC18O15417 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
TNRC18O15417 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC24.65■■□□□ 1.54
TNRC18O15417 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC24.65■■□□□ 1.54
TNRC18O15417 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC24.65■■□□□ 1.54
TNRC18O15417 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC24.65■■□□□ 1.54
TNRC18O15417 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
TNRC18O15417 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
TNRC18O15417 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
TNRC18O15417 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
TNRC18O15417 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC24.65■■□□□ 1.54
TNRC18O15417 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC24.65■■□□□ 1.54
TNRC18O15417 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC24.64■■□□□ 1.54
TNRC18O15417 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
TNRC18O15417 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC24.64■■□□□ 1.54
TNRC18O15417 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
TNRC18O15417 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC24.64■■□□□ 1.54
TNRC18O15417 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
TNRC18O15417 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC24.64■■□□□ 1.54
TNRC18O15417 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC24.64■■□□□ 1.54
TNRC18O15417 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
TNRC18O15417 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
TNRC18O15417 USF2-207ENST00000595068 1612 ntTSL 5 BASIC24.64■■□□□ 1.54
TNRC18O15417 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
TNRC18O15417 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC24.64■■□□□ 1.53
TNRC18O15417 AC073648.6-201ENST00000641589 218 ntBASIC24.64■■□□□ 1.53
TNRC18O15417 BX005040.4-201ENST00000637145 1518 ntBASIC24.64■■□□□ 1.53
TNRC18O15417 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.53
TNRC18O15417 ABHD17AP6-201ENST00000458502 1044 ntBASIC24.63■■□□□ 1.53
TNRC18O15417 BX088651.1-201ENST00000540551 451 ntBASIC24.63■■□□□ 1.53
TNRC18O15417 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC24.63■■□□□ 1.53
TNRC18O15417 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC24.63■■□□□ 1.53
TNRC18O15417 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC24.63■■□□□ 1.53
TNRC18O15417 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC24.63■■□□□ 1.53
TNRC18O15417 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
TNRC18O15417 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
TNRC18O15417 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
TNRC18O15417 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC24.63■■□□□ 1.53
TNRC18O15417 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
TNRC18O15417 APTR-203ENST00000430801 583 ntTSL 5 BASIC24.63■■□□□ 1.53
TNRC18O15417 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
TNRC18O15417 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
TNRC18O15417 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
TNRC18O15417 GAS7-202ENST00000396115 929 ntTSL 5 BASIC24.62■■□□□ 1.53
TNRC18O15417 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC24.62■■□□□ 1.53
TNRC18O15417 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
TNRC18O15417 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC24.62■■□□□ 1.53
TNRC18O15417 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC24.62■■□□□ 1.53
TNRC18O15417 FP325331.1-202ENST00000623531 1380 ntBASIC24.62■■□□□ 1.53
TNRC18O15417 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
TNRC18O15417 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
TNRC18O15417 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC24.62■■□□□ 1.53
TNRC18O15417 AP004609.3-201ENST00000610705 1884 ntBASIC24.62■■□□□ 1.53
TNRC18O15417 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
TNRC18O15417 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
TNRC18O15417 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC24.61■■□□□ 1.53
TNRC18O15417 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
TNRC18O15417 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
TNRC18O15417 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
TNRC18O15417 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC24.61■■□□□ 1.53
TNRC18O15417 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC24.61■■□□□ 1.53
TNRC18O15417 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
TNRC18O15417 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
TNRC18O15417 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms