Protein–RNA interactions for Protein: A6PVI3

NCBP2L, Nuclear cap-binding protein subunit 2-like, humanhuman

Known RBP Predictions only

Length 153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2LA6PVI3 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NCBP2LA6PVI3 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NCBP2LA6PVI3 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
NCBP2LA6PVI3 DUSP8P5-201ENST00000422884 1815 ntBASIC17.82■□□□□ 0.44
NCBP2LA6PVI3 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC17.81■□□□□ 0.44
NCBP2LA6PVI3 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
NCBP2LA6PVI3 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NCBP2LA6PVI3 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
NCBP2LA6PVI3 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NCBP2LA6PVI3 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
NCBP2LA6PVI3 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
NCBP2LA6PVI3 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC17.81■□□□□ 0.44
NCBP2LA6PVI3 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC17.81■□□□□ 0.44
NCBP2LA6PVI3 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NCBP2LA6PVI3 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NCBP2LA6PVI3 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
NCBP2LA6PVI3 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NCBP2LA6PVI3 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
NCBP2LA6PVI3 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC17.81■□□□□ 0.44
NCBP2LA6PVI3 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
NCBP2LA6PVI3 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
NCBP2LA6PVI3 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC17.81■□□□□ 0.44
NCBP2LA6PVI3 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
NCBP2LA6PVI3 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC17.8■□□□□ 0.44
NCBP2LA6PVI3 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC17.8■□□□□ 0.44
NCBP2LA6PVI3 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
NCBP2LA6PVI3 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NCBP2LA6PVI3 SYT6-210ENST00000641643 1587 ntBASIC17.8■□□□□ 0.44
NCBP2LA6PVI3 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NCBP2LA6PVI3 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NCBP2LA6PVI3 DUX4L19-201ENST00000557448 1267 ntBASIC17.8■□□□□ 0.44
NCBP2LA6PVI3 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC17.8■□□□□ 0.44
NCBP2LA6PVI3 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
NCBP2LA6PVI3 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
NCBP2LA6PVI3 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NCBP2LA6PVI3 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
NCBP2LA6PVI3 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NCBP2LA6PVI3 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
NCBP2LA6PVI3 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
NCBP2LA6PVI3 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NCBP2LA6PVI3 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
NCBP2LA6PVI3 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC17.79■□□□□ 0.44
NCBP2LA6PVI3 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NCBP2LA6PVI3 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC17.79■□□□□ 0.44
NCBP2LA6PVI3 NFE2L3P1-201ENST00000588207 1959 ntBASIC17.79■□□□□ 0.44
NCBP2LA6PVI3 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NCBP2LA6PVI3 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NCBP2LA6PVI3 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NCBP2LA6PVI3 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
NCBP2LA6PVI3 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC17.79■□□□□ 0.44
NCBP2LA6PVI3 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NCBP2LA6PVI3 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NCBP2LA6PVI3 DUX4L4-201ENST00000566884 1269 ntBASIC17.79■□□□□ 0.44
NCBP2LA6PVI3 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC17.79■□□□□ 0.44
NCBP2LA6PVI3 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC17.79■□□□□ 0.44
NCBP2LA6PVI3 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NCBP2LA6PVI3 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NCBP2LA6PVI3 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC17.79■□□□□ 0.44
NCBP2LA6PVI3 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NCBP2LA6PVI3 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
NCBP2LA6PVI3 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NCBP2LA6PVI3 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
NCBP2LA6PVI3 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC17.78■□□□□ 0.44
NCBP2LA6PVI3 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
NCBP2LA6PVI3 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
NCBP2LA6PVI3 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC17.78■□□□□ 0.44
NCBP2LA6PVI3 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
NCBP2LA6PVI3 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NCBP2LA6PVI3 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NCBP2LA6PVI3 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC17.78■□□□□ 0.44
NCBP2LA6PVI3 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NCBP2LA6PVI3 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NCBP2LA6PVI3 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
NCBP2LA6PVI3 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NCBP2LA6PVI3 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NCBP2LA6PVI3 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
NCBP2LA6PVI3 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.77■□□□□ 0.44
NCBP2LA6PVI3 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC17.77■□□□□ 0.44
NCBP2LA6PVI3 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC17.77■□□□□ 0.44
NCBP2LA6PVI3 AC006455.2-201ENST00000429931 906 ntBASIC17.77■□□□□ 0.44
NCBP2LA6PVI3 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC17.77■□□□□ 0.44
NCBP2LA6PVI3 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC17.77■□□□□ 0.44
NCBP2LA6PVI3 pRNA.6-201ENST00000610482 90 ntBASIC17.77■□□□□ 0.44
NCBP2LA6PVI3 pRNA.5-201ENST00000612139 90 ntBASIC17.77■□□□□ 0.44
NCBP2LA6PVI3 pRNA.11-201ENST00000618423 90 ntBASIC17.77■□□□□ 0.44
NCBP2LA6PVI3 pRNA.13-201ENST00000619112 90 ntBASIC17.77■□□□□ 0.44
NCBP2LA6PVI3 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NCBP2LA6PVI3 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NCBP2LA6PVI3 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
NCBP2LA6PVI3 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC17.77■□□□□ 0.43
NCBP2LA6PVI3 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC17.77■□□□□ 0.43
NCBP2LA6PVI3 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NCBP2LA6PVI3 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NCBP2LA6PVI3 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
NCBP2LA6PVI3 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NCBP2LA6PVI3 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
NCBP2LA6PVI3 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC17.76■□□□□ 0.43
NCBP2LA6PVI3 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
NCBP2LA6PVI3 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC17.76■□□□□ 0.43
NCBP2LA6PVI3 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms