Protein–RNA interactions for Protein: A6NNJ1

FAM90A9P, Putative protein FAM90A9P, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM90A9PA6NNJ1 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
FAM90A9PA6NNJ1 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FAM90A9PA6NNJ1 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FAM90A9PA6NNJ1 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.11■□□□□ 0.49
FAM90A9PA6NNJ1 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FAM90A9PA6NNJ1 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
FAM90A9PA6NNJ1 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
FAM90A9PA6NNJ1 CLDN5-201ENST00000403084 2357 ntBASIC18.1■□□□□ 0.49
FAM90A9PA6NNJ1 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
FAM90A9PA6NNJ1 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FAM90A9PA6NNJ1 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
FAM90A9PA6NNJ1 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FAM90A9PA6NNJ1 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FAM90A9PA6NNJ1 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FAM90A9PA6NNJ1 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.1■□□□□ 0.49
FAM90A9PA6NNJ1 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.1■□□□□ 0.49
FAM90A9PA6NNJ1 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
FAM90A9PA6NNJ1 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
FAM90A9PA6NNJ1 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
FAM90A9PA6NNJ1 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FAM90A9PA6NNJ1 AC079630.1-202ENST00000618127 1840 ntBASIC18.09■□□□□ 0.49
FAM90A9PA6NNJ1 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.09■□□□□ 0.49
FAM90A9PA6NNJ1 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
FAM90A9PA6NNJ1 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FAM90A9PA6NNJ1 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
FAM90A9PA6NNJ1 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
FAM90A9PA6NNJ1 AC131281.2-201ENST00000520478 145 ntBASIC18.09■□□□□ 0.49
FAM90A9PA6NNJ1 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC18.09■□□□□ 0.49
FAM90A9PA6NNJ1 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
FAM90A9PA6NNJ1 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.09■□□□□ 0.49
FAM90A9PA6NNJ1 AC137767.1-201ENST00000602918 1920 ntBASIC18.09■□□□□ 0.49
FAM90A9PA6NNJ1 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FAM90A9PA6NNJ1 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FAM90A9PA6NNJ1 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
FAM90A9PA6NNJ1 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
FAM90A9PA6NNJ1 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
FAM90A9PA6NNJ1 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
FAM90A9PA6NNJ1 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
FAM90A9PA6NNJ1 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
FAM90A9PA6NNJ1 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
FAM90A9PA6NNJ1 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
FAM90A9PA6NNJ1 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
FAM90A9PA6NNJ1 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.08■□□□□ 0.48
FAM90A9PA6NNJ1 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
FAM90A9PA6NNJ1 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.08■□□□□ 0.48
FAM90A9PA6NNJ1 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.08■□□□□ 0.48
FAM90A9PA6NNJ1 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
FAM90A9PA6NNJ1 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.08■□□□□ 0.48
FAM90A9PA6NNJ1 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.08■□□□□ 0.48
FAM90A9PA6NNJ1 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
FAM90A9PA6NNJ1 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
FAM90A9PA6NNJ1 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
FAM90A9PA6NNJ1 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
FAM90A9PA6NNJ1 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
FAM90A9PA6NNJ1 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
FAM90A9PA6NNJ1 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
FAM90A9PA6NNJ1 C17orf82-201ENST00000623772 1530 ntBASIC18.08■□□□□ 0.48
FAM90A9PA6NNJ1 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
FAM90A9PA6NNJ1 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.08■□□□□ 0.48
FAM90A9PA6NNJ1 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
FAM90A9PA6NNJ1 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
FAM90A9PA6NNJ1 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.07■□□□□ 0.48
FAM90A9PA6NNJ1 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.07■□□□□ 0.48
FAM90A9PA6NNJ1 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
FAM90A9PA6NNJ1 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
FAM90A9PA6NNJ1 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
FAM90A9PA6NNJ1 MIR4466-201ENST00000606121 54 ntBASIC18.07■□□□□ 0.48
FAM90A9PA6NNJ1 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
FAM90A9PA6NNJ1 LINC00565-201ENST00000562710 2331 ntBASIC18.07■□□□□ 0.48
FAM90A9PA6NNJ1 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
FAM90A9PA6NNJ1 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.07■□□□□ 0.48
FAM90A9PA6NNJ1 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
FAM90A9PA6NNJ1 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
FAM90A9PA6NNJ1 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
FAM90A9PA6NNJ1 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
FAM90A9PA6NNJ1 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
FAM90A9PA6NNJ1 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
FAM90A9PA6NNJ1 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.06■□□□□ 0.48
FAM90A9PA6NNJ1 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
FAM90A9PA6NNJ1 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
FAM90A9PA6NNJ1 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.06■□□□□ 0.48
FAM90A9PA6NNJ1 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.06■□□□□ 0.48
FAM90A9PA6NNJ1 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
FAM90A9PA6NNJ1 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
FAM90A9PA6NNJ1 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.06■□□□□ 0.48
FAM90A9PA6NNJ1 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
FAM90A9PA6NNJ1 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
FAM90A9PA6NNJ1 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
FAM90A9PA6NNJ1 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
FAM90A9PA6NNJ1 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.06■□□□□ 0.48
FAM90A9PA6NNJ1 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.06■□□□□ 0.48
FAM90A9PA6NNJ1 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
FAM90A9PA6NNJ1 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
FAM90A9PA6NNJ1 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
FAM90A9PA6NNJ1 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.05■□□□□ 0.48
FAM90A9PA6NNJ1 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
FAM90A9PA6NNJ1 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
FAM90A9PA6NNJ1 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
FAM90A9PA6NNJ1 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
FAM90A9PA6NNJ1 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms