Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC26.27■■□□□ 1.8
TMEM88BA6NKF7 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
TMEM88BA6NKF7 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC26.27■■□□□ 1.8
TMEM88BA6NKF7 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
TMEM88BA6NKF7 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
TMEM88BA6NKF7 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC26.26■■□□□ 1.79
TMEM88BA6NKF7 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
TMEM88BA6NKF7 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC26.26■■□□□ 1.79
TMEM88BA6NKF7 AL161729.1-201ENST00000604104 1402 ntBASIC26.26■■□□□ 1.79
TMEM88BA6NKF7 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC26.26■■□□□ 1.79
TMEM88BA6NKF7 MIR6089-201ENST00000616698 64 ntBASIC26.26■■□□□ 1.79
TMEM88BA6NKF7 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC26.26■■□□□ 1.79
TMEM88BA6NKF7 AC010501.1-201ENST00000606270 1962 ntBASIC26.26■■□□□ 1.79
TMEM88BA6NKF7 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC26.25■■□□□ 1.79
TMEM88BA6NKF7 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
TMEM88BA6NKF7 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
TMEM88BA6NKF7 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
TMEM88BA6NKF7 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
TMEM88BA6NKF7 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC26.25■■□□□ 1.79
TMEM88BA6NKF7 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC26.25■■□□□ 1.79
TMEM88BA6NKF7 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
TMEM88BA6NKF7 RHEB-204ENST00000472642 900 ntTSL 3 BASIC26.25■■□□□ 1.79
TMEM88BA6NKF7 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC26.25■■□□□ 1.79
TMEM88BA6NKF7 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
TMEM88BA6NKF7 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
TMEM88BA6NKF7 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC26.24■■□□□ 1.79
TMEM88BA6NKF7 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
TMEM88BA6NKF7 STX4-202ENST00000394998 1498 ntTSL 2 BASIC26.23■■□□□ 1.79
TMEM88BA6NKF7 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
TMEM88BA6NKF7 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
TMEM88BA6NKF7 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC26.23■■□□□ 1.79
TMEM88BA6NKF7 AC098934.4-201ENST00000564127 592 ntBASIC26.23■■□□□ 1.79
TMEM88BA6NKF7 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC26.23■■□□□ 1.79
TMEM88BA6NKF7 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
TMEM88BA6NKF7 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
TMEM88BA6NKF7 ALDH1A3-203ENST00000557963 1670 ntBASIC26.22■■□□□ 1.79
TMEM88BA6NKF7 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
TMEM88BA6NKF7 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
TMEM88BA6NKF7 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC26.22■■□□□ 1.79
TMEM88BA6NKF7 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC26.22■■□□□ 1.79
TMEM88BA6NKF7 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC26.22■■□□□ 1.79
TMEM88BA6NKF7 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
TMEM88BA6NKF7 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
TMEM88BA6NKF7 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
TMEM88BA6NKF7 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC26.21■■□□□ 1.79
TMEM88BA6NKF7 AC079140.4-201ENST00000507448 529 ntBASIC26.21■■□□□ 1.79
TMEM88BA6NKF7 RNA5SP413-201ENST00000516373 109 ntBASIC26.21■■□□□ 1.79
TMEM88BA6NKF7 AF201337.1-201ENST00000520239 748 ntBASIC26.21■■□□□ 1.79
TMEM88BA6NKF7 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC26.21■■□□□ 1.79
TMEM88BA6NKF7 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
TMEM88BA6NKF7 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
TMEM88BA6NKF7 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC26.21■■□□□ 1.79
TMEM88BA6NKF7 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC26.21■■□□□ 1.79
TMEM88BA6NKF7 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.79
TMEM88BA6NKF7 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.79
TMEM88BA6NKF7 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC26.2■■□□□ 1.78
TMEM88BA6NKF7 AL596275.1-201ENST00000423464 877 ntBASIC26.2■■□□□ 1.78
TMEM88BA6NKF7 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC26.2■■□□□ 1.78
TMEM88BA6NKF7 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC26.2■■□□□ 1.78
TMEM88BA6NKF7 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC26.2■■□□□ 1.78
TMEM88BA6NKF7 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC26.2■■□□□ 1.78
TMEM88BA6NKF7 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
TMEM88BA6NKF7 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
TMEM88BA6NKF7 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
TMEM88BA6NKF7 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
TMEM88BA6NKF7 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
TMEM88BA6NKF7 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
TMEM88BA6NKF7 AC098590.1-201ENST00000468126 897 ntBASIC26.19■■□□□ 1.78
TMEM88BA6NKF7 SMUG1P1-201ENST00000590640 811 ntBASIC26.19■■□□□ 1.78
TMEM88BA6NKF7 CPT2-209ENST00000636935 803 ntTSL 5 BASIC26.19■■□□□ 1.78
TMEM88BA6NKF7 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
TMEM88BA6NKF7 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
TMEM88BA6NKF7 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
TMEM88BA6NKF7 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
TMEM88BA6NKF7 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC26.18■■□□□ 1.78
TMEM88BA6NKF7 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC26.18■■□□□ 1.78
TMEM88BA6NKF7 FP325331.1-202ENST00000623531 1380 ntBASIC26.18■■□□□ 1.78
TMEM88BA6NKF7 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
TMEM88BA6NKF7 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
TMEM88BA6NKF7 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
TMEM88BA6NKF7 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
TMEM88BA6NKF7 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
TMEM88BA6NKF7 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC26.17■■□□□ 1.78
TMEM88BA6NKF7 DUSP5P2-201ENST00000426873 1033 ntBASIC26.17■■□□□ 1.78
TMEM88BA6NKF7 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC26.17■■□□□ 1.78
TMEM88BA6NKF7 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC26.17■■□□□ 1.78
TMEM88BA6NKF7 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC26.16■■□□□ 1.78
TMEM88BA6NKF7 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC26.16■■□□□ 1.78
TMEM88BA6NKF7 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
TMEM88BA6NKF7 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
TMEM88BA6NKF7 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
TMEM88BA6NKF7 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC26.16■■□□□ 1.78
TMEM88BA6NKF7 AC105036.2-201ENST00000569468 176 ntBASIC26.16■■□□□ 1.78
TMEM88BA6NKF7 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC26.16■■□□□ 1.78
TMEM88BA6NKF7 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC26.16■■□□□ 1.78
TMEM88BA6NKF7 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
TMEM88BA6NKF7 SLC6A10P-202ENST00000431994 2058 ntBASIC26.15■■□□□ 1.78
TMEM88BA6NKF7 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC26.15■■□□□ 1.78
TMEM88BA6NKF7 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
TMEM88BA6NKF7 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC26.15■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms