Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.38■□□□□ 0.69
SHISA3A0PJX4 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.37■□□□□ 0.69
SHISA3A0PJX4 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SHISA3A0PJX4 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
SHISA3A0PJX4 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.37■□□□□ 0.69
SHISA3A0PJX4 GPX1-201ENST00000419349 1106 ntBASIC19.37■□□□□ 0.69
SHISA3A0PJX4 HES4-202ENST00000428771 1040 ntTSL 2 BASIC19.37■□□□□ 0.69
SHISA3A0PJX4 LONRF2P2-201ENST00000439212 571 ntBASIC19.37■□□□□ 0.69
SHISA3A0PJX4 AL592293.1-201ENST00000502889 1188 ntBASIC19.37■□□□□ 0.69
SHISA3A0PJX4 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHISA3A0PJX4 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHISA3A0PJX4 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHISA3A0PJX4 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHISA3A0PJX4 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SHISA3A0PJX4 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SHISA3A0PJX4 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SHISA3A0PJX4 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
SHISA3A0PJX4 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SHISA3A0PJX4 AC011551.1-201ENST00000614101 683 ntBASIC19.36■□□□□ 0.69
SHISA3A0PJX4 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SHISA3A0PJX4 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.36■□□□□ 0.69
SHISA3A0PJX4 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.36■□□□□ 0.69
SHISA3A0PJX4 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SHISA3A0PJX4 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SHISA3A0PJX4 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.35■□□□□ 0.69
SHISA3A0PJX4 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SHISA3A0PJX4 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SHISA3A0PJX4 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SHISA3A0PJX4 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.34■□□□□ 0.69
SHISA3A0PJX4 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SHISA3A0PJX4 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SHISA3A0PJX4 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SHISA3A0PJX4 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SHISA3A0PJX4 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.34■□□□□ 0.69
SHISA3A0PJX4 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SHISA3A0PJX4 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
SHISA3A0PJX4 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
SHISA3A0PJX4 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.33■□□□□ 0.69
SHISA3A0PJX4 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SHISA3A0PJX4 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SHISA3A0PJX4 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SHISA3A0PJX4 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
SHISA3A0PJX4 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SHISA3A0PJX4 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.33■□□□□ 0.68
SHISA3A0PJX4 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SHISA3A0PJX4 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
SHISA3A0PJX4 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SHISA3A0PJX4 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
SHISA3A0PJX4 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SHISA3A0PJX4 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SHISA3A0PJX4 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SHISA3A0PJX4 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SHISA3A0PJX4 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SHISA3A0PJX4 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SHISA3A0PJX4 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SHISA3A0PJX4 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.32■□□□□ 0.68
SHISA3A0PJX4 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
SHISA3A0PJX4 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SHISA3A0PJX4 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SHISA3A0PJX4 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SHISA3A0PJX4 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
SHISA3A0PJX4 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SHISA3A0PJX4 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.31■□□□□ 0.68
SHISA3A0PJX4 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SHISA3A0PJX4 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SHISA3A0PJX4 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SHISA3A0PJX4 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SHISA3A0PJX4 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SHISA3A0PJX4 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.31■□□□□ 0.68
SHISA3A0PJX4 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SHISA3A0PJX4 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SHISA3A0PJX4 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SHISA3A0PJX4 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SHISA3A0PJX4 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SHISA3A0PJX4 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.3■□□□□ 0.68
SHISA3A0PJX4 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC19.3■□□□□ 0.68
SHISA3A0PJX4 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SHISA3A0PJX4 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SHISA3A0PJX4 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SHISA3A0PJX4 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SHISA3A0PJX4 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SHISA3A0PJX4 DUX4L9-201ENST00000449051 1259 ntBASIC19.3■□□□□ 0.68
SHISA3A0PJX4 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SHISA3A0PJX4 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SHISA3A0PJX4 MIR4449-201ENST00000578365 66 ntBASIC19.3■□□□□ 0.68
SHISA3A0PJX4 MIR6765-201ENST00000614092 87 ntBASIC19.3■□□□□ 0.68
SHISA3A0PJX4 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SHISA3A0PJX4 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
SHISA3A0PJX4 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SHISA3A0PJX4 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SHISA3A0PJX4 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SHISA3A0PJX4 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SHISA3A0PJX4 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SHISA3A0PJX4 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SHISA3A0PJX4 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SHISA3A0PJX4 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.29■□□□□ 0.68
SHISA3A0PJX4 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SHISA3A0PJX4 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SHISA3A0PJX4 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SHISA3A0PJX4 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms