Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
A0A1W2PRF3 AL353803.4-201ENST00000565882 1934 ntBASIC18.14■□□□□ 0.49
A0A1W2PRF3 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
A0A1W2PRF3 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.14■□□□□ 0.49
A0A1W2PRF3 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
A0A1W2PRF3 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
A0A1W2PRF3 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
A0A1W2PRF3 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
A0A1W2PRF3 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
A0A1W2PRF3 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC18.14■□□□□ 0.49
A0A1W2PRF3 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
A0A1W2PRF3 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
A0A1W2PRF3 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
A0A1W2PRF3 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
A0A1W2PRF3 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
A0A1W2PRF3 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
A0A1W2PRF3 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.13■□□□□ 0.49
A0A1W2PRF3 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.13■□□□□ 0.49
A0A1W2PRF3 AP001330.3-201ENST00000520123 633 ntBASIC18.13■□□□□ 0.49
A0A1W2PRF3 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.13■□□□□ 0.49
A0A1W2PRF3 AL138724.1-201ENST00000606771 1088 ntBASIC18.13■□□□□ 0.49
A0A1W2PRF3 AC136469.2-201ENST00000623944 1028 ntBASIC18.13■□□□□ 0.49
A0A1W2PRF3 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
A0A1W2PRF3 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.13■□□□□ 0.49
A0A1W2PRF3 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
A0A1W2PRF3 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
A0A1W2PRF3 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
A0A1W2PRF3 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
A0A1W2PRF3 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
A0A1W2PRF3 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
A0A1W2PRF3 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
A0A1W2PRF3 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
A0A1W2PRF3 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
A0A1W2PRF3 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
A0A1W2PRF3 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.12■□□□□ 0.49
A0A1W2PRF3 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
A0A1W2PRF3 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
A0A1W2PRF3 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
A0A1W2PRF3 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
A0A1W2PRF3 SUDS3P1-201ENST00000505831 966 ntBASIC18.12■□□□□ 0.49
A0A1W2PRF3 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.12■□□□□ 0.49
A0A1W2PRF3 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
A0A1W2PRF3 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
A0A1W2PRF3 FP325331.1-202ENST00000623531 1380 ntBASIC18.12■□□□□ 0.49
A0A1W2PRF3 LTK-203ENST00000453182 2412 ntTSL 2 BASIC18.12■□□□□ 0.49
A0A1W2PRF3 AC133637.1-201ENST00000624115 1537 ntBASIC18.12■□□□□ 0.49
A0A1W2PRF3 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
A0A1W2PRF3 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
A0A1W2PRF3 ANOS2P-203ENST00000472227 1816 ntBASIC18.12■□□□□ 0.49
A0A1W2PRF3 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC18.11■□□□□ 0.49
A0A1W2PRF3 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
A0A1W2PRF3 THRA-202ENST00000394121 2260 ntTSL 2 BASIC18.11■□□□□ 0.49
A0A1W2PRF3 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
A0A1W2PRF3 MIR935-201ENST00000401179 91 ntBASIC18.11■□□□□ 0.49
A0A1W2PRF3 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.11■□□□□ 0.49
A0A1W2PRF3 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.11■□□□□ 0.49
A0A1W2PRF3 DUX4L4-201ENST00000566884 1269 ntBASIC18.11■□□□□ 0.49
A0A1W2PRF3 AL136967.2-201ENST00000623968 743 ntBASIC18.11■□□□□ 0.49
A0A1W2PRF3 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
A0A1W2PRF3 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.11■□□□□ 0.49
A0A1W2PRF3 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.11■□□□□ 0.49
A0A1W2PRF3 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
A0A1W2PRF3 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
A0A1W2PRF3 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.11■□□□□ 0.49
A0A1W2PRF3 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
A0A1W2PRF3 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.11■□□□□ 0.49
A0A1W2PRF3 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
A0A1W2PRF3 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
A0A1W2PRF3 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
A0A1W2PRF3 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
A0A1W2PRF3 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
A0A1W2PRF3 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
A0A1W2PRF3 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
A0A1W2PRF3 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
A0A1W2PRF3 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
A0A1W2PRF3 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
A0A1W2PRF3 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
A0A1W2PRF3 AC099791.1-201ENST00000416440 715 ntBASIC18.1■□□□□ 0.49
A0A1W2PRF3 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.1■□□□□ 0.49
A0A1W2PRF3 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
A0A1W2PRF3 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
A0A1W2PRF3 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC18.1■□□□□ 0.49
A0A1W2PRF3 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
A0A1W2PRF3 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
A0A1W2PRF3 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
A0A1W2PRF3 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
A0A1W2PRF3 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
A0A1W2PRF3 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
A0A1W2PRF3 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.09■□□□□ 0.49
A0A1W2PRF3 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
A0A1W2PRF3 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.09■□□□□ 0.49
A0A1W2PRF3 MIR939-201ENST00000401314 82 ntBASIC18.09■□□□□ 0.49
A0A1W2PRF3 ZNRF2P3-201ENST00000424200 374 ntBASIC18.09■□□□□ 0.49
A0A1W2PRF3 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
A0A1W2PRF3 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.09■□□□□ 0.49
A0A1W2PRF3 AC105265.2-201ENST00000467189 838 ntBASIC18.09■□□□□ 0.49
A0A1W2PRF3 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
A0A1W2PRF3 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
A0A1W2PRF3 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
A0A1W2PRF3 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms