Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC15.66■□□□□ 0.1
TRBV27A0A0K0K1C4 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV27A0A0K0K1C4 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TRBV27A0A0K0K1C4 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC15.66■□□□□ 0.1
TRBV27A0A0K0K1C4 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV27A0A0K0K1C4 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC15.65■□□□□ 0.1
TRBV27A0A0K0K1C4 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV27A0A0K0K1C4 USF2-207ENST00000595068 1612 ntTSL 5 BASIC15.65■□□□□ 0.1
TRBV27A0A0K0K1C4 AC144652.1-201ENST00000609974 1624 ntBASIC15.65■□□□□ 0.1
TRBV27A0A0K0K1C4 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV27A0A0K0K1C4 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV27A0A0K0K1C4 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC15.65■□□□□ 0.1
TRBV27A0A0K0K1C4 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV27A0A0K0K1C4 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC15.65■□□□□ 0.1
TRBV27A0A0K0K1C4 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC15.65■□□□□ 0.1
TRBV27A0A0K0K1C4 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC15.65■□□□□ 0.1
TRBV27A0A0K0K1C4 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV27A0A0K0K1C4 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV27A0A0K0K1C4 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV27A0A0K0K1C4 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC15.65■□□□□ 0.1
TRBV27A0A0K0K1C4 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV27A0A0K0K1C4 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV27A0A0K0K1C4 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV27A0A0K0K1C4 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV27A0A0K0K1C4 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV27A0A0K0K1C4 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV27A0A0K0K1C4 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
TRBV27A0A0K0K1C4 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV27A0A0K0K1C4 AC026310.3-201ENST00000625186 2373 ntBASIC15.64■□□□□ 0.09
TRBV27A0A0K0K1C4 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV27A0A0K0K1C4 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV27A0A0K0K1C4 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV27A0A0K0K1C4 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TRBV27A0A0K0K1C4 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV27A0A0K0K1C4 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV27A0A0K0K1C4 MTX2-204ENST00000443241 799 ntTSL 3 BASIC15.64■□□□□ 0.09
TRBV27A0A0K0K1C4 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC15.64■□□□□ 0.09
TRBV27A0A0K0K1C4 AF131216.4-201ENST00000638924 1588 ntBASIC15.64■□□□□ 0.09
TRBV27A0A0K0K1C4 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC15.64■□□□□ 0.09
TRBV27A0A0K0K1C4 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV27A0A0K0K1C4 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV27A0A0K0K1C4 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV27A0A0K0K1C4 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV27A0A0K0K1C4 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV27A0A0K0K1C4 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV27A0A0K0K1C4 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV27A0A0K0K1C4 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV27A0A0K0K1C4 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC15.63■□□□□ 0.09
TRBV27A0A0K0K1C4 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV27A0A0K0K1C4 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV27A0A0K0K1C4 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV27A0A0K0K1C4 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
TRBV27A0A0K0K1C4 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV27A0A0K0K1C4 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC15.63■□□□□ 0.09
TRBV27A0A0K0K1C4 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
TRBV27A0A0K0K1C4 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV27A0A0K0K1C4 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
TRBV27A0A0K0K1C4 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV27A0A0K0K1C4 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV27A0A0K0K1C4 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC15.62■□□□□ 0.09
TRBV27A0A0K0K1C4 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV27A0A0K0K1C4 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV27A0A0K0K1C4 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV27A0A0K0K1C4 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV27A0A0K0K1C4 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV27A0A0K0K1C4 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV27A0A0K0K1C4 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV27A0A0K0K1C4 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
TRBV27A0A0K0K1C4 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC15.62■□□□□ 0.09
TRBV27A0A0K0K1C4 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC15.61■□□□□ 0.09
TRBV27A0A0K0K1C4 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV27A0A0K0K1C4 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV27A0A0K0K1C4 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV27A0A0K0K1C4 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV27A0A0K0K1C4 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC15.61■□□□□ 0.09
TRBV27A0A0K0K1C4 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV27A0A0K0K1C4 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC15.61■□□□□ 0.09
TRBV27A0A0K0K1C4 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV27A0A0K0K1C4 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC15.61■□□□□ 0.09
TRBV27A0A0K0K1C4 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC15.61■□□□□ 0.09
TRBV27A0A0K0K1C4 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC15.61■□□□□ 0.09
TRBV27A0A0K0K1C4 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC15.61■□□□□ 0.09
TRBV27A0A0K0K1C4 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV27A0A0K0K1C4 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
TRBV27A0A0K0K1C4 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRBV27A0A0K0K1C4 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC15.61■□□□□ 0.09
TRBV27A0A0K0K1C4 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
TRBV27A0A0K0K1C4 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV27A0A0K0K1C4 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC15.6■□□□□ 0.09
TRBV27A0A0K0K1C4 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV27A0A0K0K1C4 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV27A0A0K0K1C4 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV27A0A0K0K1C4 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC15.6■□□□□ 0.09
TRBV27A0A0K0K1C4 AC120024.1-201ENST00000562672 995 ntBASIC15.6■□□□□ 0.09
TRBV27A0A0K0K1C4 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC15.6■□□□□ 0.09
TRBV27A0A0K0K1C4 AC129492.7-201ENST00000622992 756 ntBASIC15.6■□□□□ 0.09
TRBV27A0A0K0K1C4 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV27A0A0K0K1C4 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV27A0A0K0K1C4 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRBV27A0A0K0K1C4 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms