Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
IGHV4-28A0A0C4DH34 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC15.99■□□□□ 0.15
IGHV4-28A0A0C4DH34 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
IGHV4-28A0A0C4DH34 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
IGHV4-28A0A0C4DH34 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
IGHV4-28A0A0C4DH34 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
IGHV4-28A0A0C4DH34 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
IGHV4-28A0A0C4DH34 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
IGHV4-28A0A0C4DH34 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
IGHV4-28A0A0C4DH34 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
IGHV4-28A0A0C4DH34 AL353803.4-201ENST00000565882 1934 ntBASIC15.98■□□□□ 0.15
IGHV4-28A0A0C4DH34 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
IGHV4-28A0A0C4DH34 SNX3-202ENST00000349379 890 ntTSL 2 BASIC15.98■□□□□ 0.15
IGHV4-28A0A0C4DH34 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
IGHV4-28A0A0C4DH34 ZNRF2P3-201ENST00000424200 374 ntBASIC15.98■□□□□ 0.15
IGHV4-28A0A0C4DH34 SLC47A1P1-202ENST00000449666 945 ntBASIC15.98■□□□□ 0.15
IGHV4-28A0A0C4DH34 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC15.98■□□□□ 0.15
IGHV4-28A0A0C4DH34 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC15.98■□□□□ 0.15
IGHV4-28A0A0C4DH34 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
IGHV4-28A0A0C4DH34 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
IGHV4-28A0A0C4DH34 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
IGHV4-28A0A0C4DH34 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
IGHV4-28A0A0C4DH34 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
IGHV4-28A0A0C4DH34 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC15.98■□□□□ 0.15
IGHV4-28A0A0C4DH34 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
IGHV4-28A0A0C4DH34 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC15.97■□□□□ 0.15
IGHV4-28A0A0C4DH34 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC15.97■□□□□ 0.15
IGHV4-28A0A0C4DH34 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
IGHV4-28A0A0C4DH34 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
IGHV4-28A0A0C4DH34 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
IGHV4-28A0A0C4DH34 GRAMD4P2-201ENST00000423297 1097 ntBASIC15.97■□□□□ 0.15
IGHV4-28A0A0C4DH34 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC15.97■□□□□ 0.15
IGHV4-28A0A0C4DH34 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC15.97■□□□□ 0.15
IGHV4-28A0A0C4DH34 STOX2-205ENST00000513034 807 ntTSL 3 BASIC15.97■□□□□ 0.15
IGHV4-28A0A0C4DH34 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
IGHV4-28A0A0C4DH34 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
IGHV4-28A0A0C4DH34 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC15.97■□□□□ 0.15
IGHV4-28A0A0C4DH34 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
IGHV4-28A0A0C4DH34 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
IGHV4-28A0A0C4DH34 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
IGHV4-28A0A0C4DH34 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
IGHV4-28A0A0C4DH34 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
IGHV4-28A0A0C4DH34 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
IGHV4-28A0A0C4DH34 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
IGHV4-28A0A0C4DH34 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC15.96■□□□□ 0.15
IGHV4-28A0A0C4DH34 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
IGHV4-28A0A0C4DH34 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
IGHV4-28A0A0C4DH34 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
IGHV4-28A0A0C4DH34 AC126544.1-201ENST00000580842 1059 ntBASIC15.96■□□□□ 0.15
IGHV4-28A0A0C4DH34 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC15.96■□□□□ 0.15
IGHV4-28A0A0C4DH34 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
IGHV4-28A0A0C4DH34 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
IGHV4-28A0A0C4DH34 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
IGHV4-28A0A0C4DH34 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
IGHV4-28A0A0C4DH34 ANOS2P-203ENST00000472227 1816 ntBASIC15.96■□□□□ 0.14
IGHV4-28A0A0C4DH34 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
IGHV4-28A0A0C4DH34 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
IGHV4-28A0A0C4DH34 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
IGHV4-28A0A0C4DH34 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
IGHV4-28A0A0C4DH34 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
IGHV4-28A0A0C4DH34 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
IGHV4-28A0A0C4DH34 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
IGHV4-28A0A0C4DH34 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
IGHV4-28A0A0C4DH34 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC15.95■□□□□ 0.14
IGHV4-28A0A0C4DH34 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC15.95■□□□□ 0.14
IGHV4-28A0A0C4DH34 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC15.95■□□□□ 0.14
IGHV4-28A0A0C4DH34 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC15.95■□□□□ 0.14
IGHV4-28A0A0C4DH34 MPST-208ENST00000628507 698 ntTSL 5 BASIC15.95■□□□□ 0.14
IGHV4-28A0A0C4DH34 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC15.95■□□□□ 0.14
IGHV4-28A0A0C4DH34 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC15.95■□□□□ 0.14
IGHV4-28A0A0C4DH34 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
IGHV4-28A0A0C4DH34 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC15.94■□□□□ 0.14
IGHV4-28A0A0C4DH34 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
IGHV4-28A0A0C4DH34 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
IGHV4-28A0A0C4DH34 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
IGHV4-28A0A0C4DH34 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
IGHV4-28A0A0C4DH34 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
IGHV4-28A0A0C4DH34 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC15.94■□□□□ 0.14
IGHV4-28A0A0C4DH34 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
IGHV4-28A0A0C4DH34 OR2I1P-207ENST00000453522 948 ntBASIC15.94■□□□□ 0.14
IGHV4-28A0A0C4DH34 LGR4-203ENST00000480977 492 ntTSL 2 BASIC15.94■□□□□ 0.14
IGHV4-28A0A0C4DH34 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
IGHV4-28A0A0C4DH34 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC15.94■□□□□ 0.14
IGHV4-28A0A0C4DH34 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
IGHV4-28A0A0C4DH34 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC15.94■□□□□ 0.14
IGHV4-28A0A0C4DH34 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
IGHV4-28A0A0C4DH34 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
IGHV4-28A0A0C4DH34 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
IGHV4-28A0A0C4DH34 AC004687.1-201ENST00000579003 1625 ntBASIC15.94■□□□□ 0.14
IGHV4-28A0A0C4DH34 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
IGHV4-28A0A0C4DH34 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
IGHV4-28A0A0C4DH34 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC15.93■□□□□ 0.14
IGHV4-28A0A0C4DH34 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
IGHV4-28A0A0C4DH34 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
IGHV4-28A0A0C4DH34 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
IGHV4-28A0A0C4DH34 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC15.93■□□□□ 0.14
IGHV4-28A0A0C4DH34 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
IGHV4-28A0A0C4DH34 AC010525.1-201ENST00000585559 441 ntBASIC15.93■□□□□ 0.14
IGHV4-28A0A0C4DH34 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
IGHV4-28A0A0C4DH34 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms