Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV12-3A0A0B4J271 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV12-3A0A0B4J271 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV12-3A0A0B4J271 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV12-3A0A0B4J271 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
TRAV12-3A0A0B4J271 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC16.41■□□□□ 0.22
TRAV12-3A0A0B4J271 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV12-3A0A0B4J271 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV12-3A0A0B4J271 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
TRAV12-3A0A0B4J271 GCA-201ENST00000233612 1694 ntTSL 2 BASIC16.41■□□□□ 0.22
TRAV12-3A0A0B4J271 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV12-3A0A0B4J271 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV12-3A0A0B4J271 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV12-3A0A0B4J271 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC16.41■□□□□ 0.22
TRAV12-3A0A0B4J271 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC16.41■□□□□ 0.22
TRAV12-3A0A0B4J271 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
TRAV12-3A0A0B4J271 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV12-3A0A0B4J271 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV12-3A0A0B4J271 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC16.41■□□□□ 0.22
TRAV12-3A0A0B4J271 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC16.41■□□□□ 0.22
TRAV12-3A0A0B4J271 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TRAV12-3A0A0B4J271 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV12-3A0A0B4J271 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TRAV12-3A0A0B4J271 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TRAV12-3A0A0B4J271 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV12-3A0A0B4J271 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV12-3A0A0B4J271 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC16.4■□□□□ 0.22
TRAV12-3A0A0B4J271 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC16.4■□□□□ 0.22
TRAV12-3A0A0B4J271 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC16.4■□□□□ 0.22
TRAV12-3A0A0B4J271 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
TRAV12-3A0A0B4J271 MTDHP2-201ENST00000601468 714 ntBASIC16.4■□□□□ 0.22
TRAV12-3A0A0B4J271 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV12-3A0A0B4J271 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC16.4■□□□□ 0.22
TRAV12-3A0A0B4J271 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TRAV12-3A0A0B4J271 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV12-3A0A0B4J271 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV12-3A0A0B4J271 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV12-3A0A0B4J271 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC16.4■□□□□ 0.22
TRAV12-3A0A0B4J271 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV12-3A0A0B4J271 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
TRAV12-3A0A0B4J271 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
TRAV12-3A0A0B4J271 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TRAV12-3A0A0B4J271 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV12-3A0A0B4J271 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV12-3A0A0B4J271 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV12-3A0A0B4J271 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC16.39■□□□□ 0.21
TRAV12-3A0A0B4J271 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV12-3A0A0B4J271 GUSBP5-202ENST00000510805 1989 ntBASIC16.39■□□□□ 0.21
TRAV12-3A0A0B4J271 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV12-3A0A0B4J271 AC239859.2-201ENST00000444165 318 ntBASIC16.39■□□□□ 0.21
TRAV12-3A0A0B4J271 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV12-3A0A0B4J271 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC16.39■□□□□ 0.21
TRAV12-3A0A0B4J271 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
TRAV12-3A0A0B4J271 Z92544.1-202ENST00000571933 1220 ntBASIC16.39■□□□□ 0.21
TRAV12-3A0A0B4J271 MIR4787-201ENST00000607364 84 ntBASIC16.39■□□□□ 0.21
TRAV12-3A0A0B4J271 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV12-3A0A0B4J271 EP400NL-214ENST00000641289 2402 ntBASIC16.39■□□□□ 0.21
TRAV12-3A0A0B4J271 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV12-3A0A0B4J271 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV12-3A0A0B4J271 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV12-3A0A0B4J271 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC16.39■□□□□ 0.21
TRAV12-3A0A0B4J271 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV12-3A0A0B4J271 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV12-3A0A0B4J271 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC16.38■□□□□ 0.21
TRAV12-3A0A0B4J271 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC16.38■□□□□ 0.21
TRAV12-3A0A0B4J271 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC16.38■□□□□ 0.21
TRAV12-3A0A0B4J271 CLTA-206ENST00000466396 695 ntTSL 2 BASIC16.38■□□□□ 0.21
TRAV12-3A0A0B4J271 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC16.38■□□□□ 0.21
TRAV12-3A0A0B4J271 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
TRAV12-3A0A0B4J271 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC16.38■□□□□ 0.21
TRAV12-3A0A0B4J271 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV12-3A0A0B4J271 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV12-3A0A0B4J271 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV12-3A0A0B4J271 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
TRAV12-3A0A0B4J271 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
TRAV12-3A0A0B4J271 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV12-3A0A0B4J271 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
TRAV12-3A0A0B4J271 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV12-3A0A0B4J271 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TRAV12-3A0A0B4J271 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC16.37■□□□□ 0.21
TRAV12-3A0A0B4J271 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV12-3A0A0B4J271 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV12-3A0A0B4J271 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV12-3A0A0B4J271 TSPY9P-201ENST00000440215 945 ntBASIC16.37■□□□□ 0.21
TRAV12-3A0A0B4J271 TSPY11P-201ENST00000442607 1045 ntBASIC16.37■□□□□ 0.21
TRAV12-3A0A0B4J271 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC16.37■□□□□ 0.21
TRAV12-3A0A0B4J271 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC16.37■□□□□ 0.21
TRAV12-3A0A0B4J271 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV12-3A0A0B4J271 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV12-3A0A0B4J271 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV12-3A0A0B4J271 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV12-3A0A0B4J271 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV12-3A0A0B4J271 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV12-3A0A0B4J271 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC16.37■□□□□ 0.21
TRAV12-3A0A0B4J271 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
TRAV12-3A0A0B4J271 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV12-3A0A0B4J271 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV12-3A0A0B4J271 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
TRAV12-3A0A0B4J271 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC16.36■□□□□ 0.21
TRAV12-3A0A0B4J271 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms