Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC15.61■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 AC092068.2-201ENST00000590491 1708 ntBASIC15.6■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 AL024507.2-201ENST00000606070 2574 ntBASIC15.6■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC15.6■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC15.6■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC15.6■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC15.6■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 AC127496.7-201ENST00000625110 1798 ntBASIC15.59■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC15.59■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC15.59■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC15.59■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC15.59■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC15.59■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 STK32C-205ENST00000456004 607 ntTSL 2 BASIC15.59■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC15.59■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC15.59■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC15.59■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC15.59■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 AC137767.1-201ENST00000602918 1920 ntBASIC15.58■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC15.58■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRAV8-3A0A0A6YYJ7 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC15.58■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC15.58■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 AC138932.1-201ENST00000534164 6830 ntBASIC15.58■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC15.58■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC15.58■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC15.58■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 AC009299.2-201ENST00000482477 511 ntBASIC15.58■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC15.58■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 AL451085.2-201ENST00000605085 799 ntBASIC15.58■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 AL161729.1-201ENST00000604104 1402 ntBASIC15.58■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC15.58■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 ECEL1P1-201ENST00000373592 1742 ntBASIC15.57■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 LSM7-203ENST00000585409 512 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC15.57■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 LBH-205ENST00000407930 756 ntTSL 2 BASIC15.56■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC15.56■□□□□ 0.08
TRAV8-3A0A0A6YYJ7 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms