Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.13■□□□□ 0.97
CCDC187A0A096LP49 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.13■□□□□ 0.97
CCDC187A0A096LP49 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.13■□□□□ 0.97
CCDC187A0A096LP49 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.13■□□□□ 0.97
CCDC187A0A096LP49 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC187A0A096LP49 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.13■□□□□ 0.97
CCDC187A0A096LP49 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.12■□□□□ 0.97
CCDC187A0A096LP49 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC187A0A096LP49 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.12■□□□□ 0.97
CCDC187A0A096LP49 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC187A0A096LP49 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC187A0A096LP49 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC187A0A096LP49 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC187A0A096LP49 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC187A0A096LP49 AC016769.1-201ENST00000409132 1010 ntBASIC21.12■□□□□ 0.97
CCDC187A0A096LP49 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.12■□□□□ 0.97
CCDC187A0A096LP49 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.12■□□□□ 0.97
CCDC187A0A096LP49 AC080038.1-201ENST00000611274 1154 ntBASIC21.12■□□□□ 0.97
CCDC187A0A096LP49 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC187A0A096LP49 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC187A0A096LP49 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.11■□□□□ 0.97
CCDC187A0A096LP49 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC187A0A096LP49 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
CCDC187A0A096LP49 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.11■□□□□ 0.97
CCDC187A0A096LP49 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.11■□□□□ 0.97
CCDC187A0A096LP49 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.11■□□□□ 0.97
CCDC187A0A096LP49 AC137761.2-201ENST00000561729 223 ntBASIC21.11■□□□□ 0.97
CCDC187A0A096LP49 AC145350.3-201ENST00000569033 163 ntBASIC21.11■□□□□ 0.97
CCDC187A0A096LP49 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.11■□□□□ 0.97
CCDC187A0A096LP49 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.11■□□□□ 0.97
CCDC187A0A096LP49 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC187A0A096LP49 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.11■□□□□ 0.97
CCDC187A0A096LP49 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC187A0A096LP49 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.11■□□□□ 0.97
CCDC187A0A096LP49 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
CCDC187A0A096LP49 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CCDC187A0A096LP49 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC187A0A096LP49 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC187A0A096LP49 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC187A0A096LP49 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
CCDC187A0A096LP49 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.1■□□□□ 0.97
CCDC187A0A096LP49 HLA-L-209ENST00000420110 1011 ntBASIC21.1■□□□□ 0.97
CCDC187A0A096LP49 AC006015.1-201ENST00000429970 570 ntBASIC21.1■□□□□ 0.97
CCDC187A0A096LP49 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.1■□□□□ 0.97
CCDC187A0A096LP49 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.1■□□□□ 0.97
CCDC187A0A096LP49 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC187A0A096LP49 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC187A0A096LP49 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC187A0A096LP49 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC187A0A096LP49 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC187A0A096LP49 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC187A0A096LP49 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC187A0A096LP49 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC187A0A096LP49 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.09■□□□□ 0.97
CCDC187A0A096LP49 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.09■□□□□ 0.97
CCDC187A0A096LP49 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.09■□□□□ 0.97
CCDC187A0A096LP49 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.09■□□□□ 0.97
CCDC187A0A096LP49 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC187A0A096LP49 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC187A0A096LP49 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC187A0A096LP49 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC187A0A096LP49 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC187A0A096LP49 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC187A0A096LP49 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CCDC187A0A096LP49 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CCDC187A0A096LP49 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
CCDC187A0A096LP49 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.08■□□□□ 0.97
CCDC187A0A096LP49 TPRG1LP1-201ENST00000598702 760 ntBASIC21.08■□□□□ 0.97
CCDC187A0A096LP49 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.08■□□□□ 0.97
CCDC187A0A096LP49 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC187A0A096LP49 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC187A0A096LP49 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC187A0A096LP49 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CCDC187A0A096LP49 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC187A0A096LP49 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.07■□□□□ 0.96
CCDC187A0A096LP49 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.07■□□□□ 0.96
CCDC187A0A096LP49 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
CCDC187A0A096LP49 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC187A0A096LP49 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.07■□□□□ 0.96
CCDC187A0A096LP49 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC187A0A096LP49 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.07■□□□□ 0.96
CCDC187A0A096LP49 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CCDC187A0A096LP49 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC187A0A096LP49 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CCDC187A0A096LP49 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC187A0A096LP49 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.06■□□□□ 0.96
CCDC187A0A096LP49 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC187A0A096LP49 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC187A0A096LP49 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CCDC187A0A096LP49 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.06■□□□□ 0.96
CCDC187A0A096LP49 KRT18P61-201ENST00000585825 1298 ntBASIC21.06■□□□□ 0.96
CCDC187A0A096LP49 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.06■□□□□ 0.96
CCDC187A0A096LP49 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC187A0A096LP49 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.06■□□□□ 0.96
CCDC187A0A096LP49 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC187A0A096LP49 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC187A0A096LP49 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC187A0A096LP49 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC187A0A096LP49 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC187A0A096LP49 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms