Protein–RNA interactions for Protein: A0A075B6N2

TRBV20-1, T-cell receptor beta variable 20-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1A0A075B6N2 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
TRBV20-1A0A075B6N2 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV20-1A0A075B6N2 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC14.82□□□□□ -0.04
TRBV20-1A0A075B6N2 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TRBV20-1A0A075B6N2 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC14.82□□□□□ -0.04
TRBV20-1A0A075B6N2 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV20-1A0A075B6N2 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
TRBV20-1A0A075B6N2 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV20-1A0A075B6N2 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TRBV20-1A0A075B6N2 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV20-1A0A075B6N2 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC14.82□□□□□ -0.04
TRBV20-1A0A075B6N2 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV20-1A0A075B6N2 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
TRBV20-1A0A075B6N2 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
TRBV20-1A0A075B6N2 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRBV20-1A0A075B6N2 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRBV20-1A0A075B6N2 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRBV20-1A0A075B6N2 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRBV20-1A0A075B6N2 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRBV20-1A0A075B6N2 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC14.81□□□□□ -0.04
TRBV20-1A0A075B6N2 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC14.81□□□□□ -0.04
TRBV20-1A0A075B6N2 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC14.81□□□□□ -0.04
TRBV20-1A0A075B6N2 AP002365.1-201ENST00000603448 772 ntBASIC14.81□□□□□ -0.04
TRBV20-1A0A075B6N2 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRBV20-1A0A075B6N2 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
TRBV20-1A0A075B6N2 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRBV20-1A0A075B6N2 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRBV20-1A0A075B6N2 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRBV20-1A0A075B6N2 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRBV20-1A0A075B6N2 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC14.81□□□□□ -0.04
TRBV20-1A0A075B6N2 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
TRBV20-1A0A075B6N2 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
TRBV20-1A0A075B6N2 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC14.8□□□□□ -0.04
TRBV20-1A0A075B6N2 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV20-1A0A075B6N2 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV20-1A0A075B6N2 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
TRBV20-1A0A075B6N2 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
TRBV20-1A0A075B6N2 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV20-1A0A075B6N2 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV20-1A0A075B6N2 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC14.8□□□□□ -0.04
TRBV20-1A0A075B6N2 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV20-1A0A075B6N2 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV20-1A0A075B6N2 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC14.8□□□□□ -0.04
TRBV20-1A0A075B6N2 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV20-1A0A075B6N2 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC14.8□□□□□ -0.04
TRBV20-1A0A075B6N2 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
TRBV20-1A0A075B6N2 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
TRBV20-1A0A075B6N2 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
TRBV20-1A0A075B6N2 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV20-1A0A075B6N2 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
TRBV20-1A0A075B6N2 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV20-1A0A075B6N2 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC14.8□□□□□ -0.04
TRBV20-1A0A075B6N2 AL157384.1-201ENST00000445995 2473 ntBASIC14.8□□□□□ -0.04
TRBV20-1A0A075B6N2 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV20-1A0A075B6N2 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
TRBV20-1A0A075B6N2 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV20-1A0A075B6N2 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV20-1A0A075B6N2 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV20-1A0A075B6N2 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV20-1A0A075B6N2 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV20-1A0A075B6N2 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV20-1A0A075B6N2 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC14.79□□□□□ -0.04
TRBV20-1A0A075B6N2 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV20-1A0A075B6N2 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV20-1A0A075B6N2 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV20-1A0A075B6N2 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV20-1A0A075B6N2 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV20-1A0A075B6N2 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV20-1A0A075B6N2 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV20-1A0A075B6N2 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
TRBV20-1A0A075B6N2 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
TRBV20-1A0A075B6N2 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV20-1A0A075B6N2 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV20-1A0A075B6N2 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
TRBV20-1A0A075B6N2 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV20-1A0A075B6N2 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC14.78□□□□□ -0.04
TRBV20-1A0A075B6N2 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV20-1A0A075B6N2 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV20-1A0A075B6N2 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC14.78□□□□□ -0.04
TRBV20-1A0A075B6N2 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV20-1A0A075B6N2 FAM99A-202ENST00000538190 1989 ntBASIC14.78□□□□□ -0.04
TRBV20-1A0A075B6N2 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TRBV20-1A0A075B6N2 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.04
TRBV20-1A0A075B6N2 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRBV20-1A0A075B6N2 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRBV20-1A0A075B6N2 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRBV20-1A0A075B6N2 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRBV20-1A0A075B6N2 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRBV20-1A0A075B6N2 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC14.77□□□□□ -0.05
TRBV20-1A0A075B6N2 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV20-1A0A075B6N2 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
TRBV20-1A0A075B6N2 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV20-1A0A075B6N2 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV20-1A0A075B6N2 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC14.77□□□□□ -0.05
TRBV20-1A0A075B6N2 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
TRBV20-1A0A075B6N2 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV20-1A0A075B6N2 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
TRBV20-1A0A075B6N2 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC14.76□□□□□ -0.05
TRBV20-1A0A075B6N2 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV20-1A0A075B6N2 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms