Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC12.61□□□□□ -0.39
AMBRA1Q9C0C7 POU5F1P2-201ENST00000521750 823 ntBASIC12.61□□□□□ -0.39
AMBRA1Q9C0C7 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC12.61□□□□□ -0.39
AMBRA1Q9C0C7 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC12.61□□□□□ -0.39
AMBRA1Q9C0C7 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC12.61□□□□□ -0.39
AMBRA1Q9C0C7 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC12.61□□□□□ -0.39
AMBRA1Q9C0C7 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
AMBRA1Q9C0C7 CHMP4BP1-201ENST00000556017 588 ntBASIC12.61□□□□□ -0.39
AMBRA1Q9C0C7 MIR4722-201ENST00000578292 60 ntBASIC12.61□□□□□ -0.39
AMBRA1Q9C0C7 MIR4754-201ENST00000582477 89 ntBASIC12.61□□□□□ -0.39
AMBRA1Q9C0C7 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC12.61□□□□□ -0.39
AMBRA1Q9C0C7 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC12.61□□□□□ -0.39
AMBRA1Q9C0C7 AL049840.2-201ENST00000602722 535 ntBASIC12.61□□□□□ -0.39
AMBRA1Q9C0C7 MEG3_2.1-201ENST00000611456 105 ntBASIC12.61□□□□□ -0.39
AMBRA1Q9C0C7 PRIMPOL-201ENST00000314970 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
AMBRA1Q9C0C7 FILIP1L-203ENST00000383694 3280 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
AMBRA1Q9C0C7 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
AMBRA1Q9C0C7 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
AMBRA1Q9C0C7 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
AMBRA1Q9C0C7 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
AMBRA1Q9C0C7 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
AMBRA1Q9C0C7 ZC3H18-202ENST00000452588 3211 ntTSL 2 BASIC12.61□□□□□ -0.39
AMBRA1Q9C0C7 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
AMBRA1Q9C0C7 SMG8-202ENST00000543872 3477 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
AMBRA1Q9C0C7 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
AMBRA1Q9C0C7 SPAG8-201ENST00000340291 1759 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
AMBRA1Q9C0C7 DDX19B-208ENST00000563392 1760 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
AMBRA1Q9C0C7 TUT1-202ENST00000308436 2826 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
AMBRA1Q9C0C7 HMGCS1-201ENST00000325110 3506 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
AMBRA1Q9C0C7 HSP90AA1-202ENST00000334701 3510 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
AMBRA1Q9C0C7 C5orf15-201ENST00000231512 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
AMBRA1Q9C0C7 IGHG1-202ENST00000390548 2619 ntAPPRIS P5 BASIC12.6□□□□□ -0.39
AMBRA1Q9C0C7 HACD3-201ENST00000261875 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
AMBRA1Q9C0C7 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC12.6□□□□□ -0.39
AMBRA1Q9C0C7 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
AMBRA1Q9C0C7 MOG-225ENST00000431798 1814 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
AMBRA1Q9C0C7 PNMA5-204ENST00000452693 3113 ntAPPRIS P2 TSL 2 BASIC12.6□□□□□ -0.39
AMBRA1Q9C0C7 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
AMBRA1Q9C0C7 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
AMBRA1Q9C0C7 CAPN8-201ENST00000366872 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
AMBRA1Q9C0C7 SIRPA-204ENST00000622179 4570 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
AMBRA1Q9C0C7 FPGT-202ENST00000370898 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
AMBRA1Q9C0C7 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
AMBRA1Q9C0C7 KIAA1324-210ENST00000529753 2903 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
AMBRA1Q9C0C7 USP11-204ENST00000377107 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
AMBRA1Q9C0C7 FSTL1-202ENST00000424703 1396 ntTSL 2 BASIC12.6□□□□□ -0.39
AMBRA1Q9C0C7 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
AMBRA1Q9C0C7 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
AMBRA1Q9C0C7 ATP1A1-201ENST00000295598 3654 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
AMBRA1Q9C0C7 PARN-203ENST00000437198 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
AMBRA1Q9C0C7 FOSB-203ENST00000443841 3346 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
AMBRA1Q9C0C7 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
AMBRA1Q9C0C7 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
AMBRA1Q9C0C7 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
AMBRA1Q9C0C7 NBPF17P-201ENST00000401087 2119 ntBASIC12.6□□□□□ -0.39
AMBRA1Q9C0C7 MIR1307-201ENST00000408840 149 ntBASIC12.6□□□□□ -0.39
AMBRA1Q9C0C7 SERF2-206ENST00000409291 807 ntTSL 3 BASIC12.6□□□□□ -0.39
AMBRA1Q9C0C7 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC12.6□□□□□ -0.39
AMBRA1Q9C0C7 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC12.6□□□□□ -0.39
AMBRA1Q9C0C7 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC12.6□□□□□ -0.39
AMBRA1Q9C0C7 RN7SL788P-201ENST00000460504 316 ntBASIC12.6□□□□□ -0.39
AMBRA1Q9C0C7 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC12.6□□□□□ -0.39
AMBRA1Q9C0C7 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC12.6□□□□□ -0.39
AMBRA1Q9C0C7 NUP210P1-202ENST00000504322 710 ntBASIC12.6□□□□□ -0.39
AMBRA1Q9C0C7 AC245884.6-201ENST00000515672 1067 ntBASIC12.6□□□□□ -0.39
AMBRA1Q9C0C7 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC12.6□□□□□ -0.39
AMBRA1Q9C0C7 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC12.6□□□□□ -0.39
AMBRA1Q9C0C7 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC12.6□□□□□ -0.39
AMBRA1Q9C0C7 AL353770.1-201ENST00000614915 403 ntBASIC12.6□□□□□ -0.39
AMBRA1Q9C0C7 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC12.6□□□□□ -0.39
AMBRA1Q9C0C7 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC12.6□□□□□ -0.39
AMBRA1Q9C0C7 SLC7A9-201ENST00000023064 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
AMBRA1Q9C0C7 GFI1B-202ENST00000372122 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
AMBRA1Q9C0C7 AFG3L2P1-201ENST00000521792 1763 ntBASIC12.6□□□□□ -0.39
AMBRA1Q9C0C7 MDH2-204ENST00000443006 2020 ntTSL 2 BASIC12.6□□□□□ -0.39
AMBRA1Q9C0C7 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC12.6□□□□□ -0.39
AMBRA1Q9C0C7 KLC4-201ENST00000259708 2688 ntAPPRIS P4 TSL 2 BASIC12.6□□□□□ -0.39
AMBRA1Q9C0C7 ABCC4-207ENST00000629385 2903 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
AMBRA1Q9C0C7 PYGM-201ENST00000164139 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
AMBRA1Q9C0C7 TBC1D22A-203ENST00000380995 3934 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
AMBRA1Q9C0C7 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
AMBRA1Q9C0C7 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
AMBRA1Q9C0C7 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
AMBRA1Q9C0C7 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
AMBRA1Q9C0C7 ASAH2B-202ENST00000374007 3715 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
AMBRA1Q9C0C7 OFD1-203ENST00000380567 3736 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
AMBRA1Q9C0C7 SLC11A1-201ENST00000233202 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
AMBRA1Q9C0C7 NAPB-207ENST00000617876 3883 ntAPPRIS ALT1 TSL 2 BASIC12.6□□□□□ -0.39
AMBRA1Q9C0C7 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
AMBRA1Q9C0C7 ZNF667-201ENST00000292069 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
AMBRA1Q9C0C7 NRDC-214ENST00000544028 3819 ntTSL 5 BASIC12.59□□□□□ -0.39
AMBRA1Q9C0C7 C19orf12-208ENST00000614091 4489 ntAPPRIS P1 TSL 4 BASIC12.59□□□□□ -0.39
AMBRA1Q9C0C7 CA10-202ENST00000442502 2935 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
AMBRA1Q9C0C7 TNKS-213ENST00000522110 2900 ntBASIC12.59□□□□□ -0.39
AMBRA1Q9C0C7 SELPLG-203ENST00000550948 2256 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
AMBRA1Q9C0C7 ZKSCAN1-202ENST00000426572 2011 ntTSL 2 BASIC12.59□□□□□ -0.39
AMBRA1Q9C0C7 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC12.59□□□□□ -0.39
AMBRA1Q9C0C7 MED24-204ENST00000394128 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
AMBRA1Q9C0C7 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
AMBRA1Q9C0C7 POFUT2-203ENST00000349485 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms