Protein–RNA interactions for Protein: Q8TC41

RNF217, Probable E3 ubiquitin-protein ligase RNF217, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF217Q8TC41 MYRF-201ENST00000265460 5745 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
RNF217Q8TC41 COG7-201ENST00000307149 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RNF217Q8TC41 SUCO-209ENST00000610051 2925 ntTSL 2 BASIC13.16□□□□□ -0.3
RNF217Q8TC41 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RNF217Q8TC41 HMGB1-206ENST00000405805 4199 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
RNF217Q8TC41 CACNA1C-213ENST00000399629 6562 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RNF217Q8TC41 AC005865.1-201ENST00000432994 3004 ntTSL 2 BASIC13.16□□□□□ -0.3
RNF217Q8TC41 DSCR3-201ENST00000309117 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RNF217Q8TC41 DNMT3B-203ENST00000348286 4048 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RNF217Q8TC41 KCNH1-201ENST00000271751 8172 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
RNF217Q8TC41 PDE7B-201ENST00000308191 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RNF217Q8TC41 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RNF217Q8TC41 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC13.16□□□□□ -0.3
RNF217Q8TC41 PPP4R3B-206ENST00000616407 4385 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RNF217Q8TC41 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC13.16□□□□□ -0.3
RNF217Q8TC41 NWD1-206ENST00000552788 6964 ntAPPRIS P5 TSL 5 BASIC13.16□□□□□ -0.3
RNF217Q8TC41 FLNA-219ENST00000610817 7595 ntTSL 5 BASIC13.16□□□□□ -0.3
RNF217Q8TC41 SLC26A6-203ENST00000358747 2729 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RNF217Q8TC41 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RNF217Q8TC41 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RNF217Q8TC41 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RNF217Q8TC41 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC13.16□□□□□ -0.3
RNF217Q8TC41 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RNF217Q8TC41 AC009084.2-201ENST00000624046 2810 ntBASIC13.16□□□□□ -0.3
RNF217Q8TC41 FP565324.1-201ENST00000636427 3659 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
RNF217Q8TC41 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RNF217Q8TC41 TAF1C-203ENST00000541676 3502 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
RNF217Q8TC41 CANT1-202ENST00000392446 3252 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RNF217Q8TC41 SRPK3-208ENST00000489426 4479 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
RNF217Q8TC41 AC245100.6-201ENST00000427169 1918 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RNF217Q8TC41 ITSN1-207ENST00000399338 3115 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RNF217Q8TC41 PLK4-209ENST00000513090 3123 ntTSL 2 BASIC13.15□□□□□ -0.3
RNF217Q8TC41 RAPGEF3-202ENST00000395358 4092 ntTSL 2 BASIC13.15□□□□□ -0.3
RNF217Q8TC41 NLRP7-206ENST00000588756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
RNF217Q8TC41 BRINP2-201ENST00000361539 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RNF217Q8TC41 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RNF217Q8TC41 HERC6-201ENST00000264346 3779 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
RNF217Q8TC41 ZKSCAN3-203ENST00000377255 4799 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RNF217Q8TC41 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RNF217Q8TC41 ADPRH-204ENST00000478399 4546 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RNF217Q8TC41 AQP2-201ENST00000199280 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RNF217Q8TC41 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RNF217Q8TC41 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC13.15□□□□□ -0.3
RNF217Q8TC41 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC13.15□□□□□ -0.3
RNF217Q8TC41 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC13.15□□□□□ -0.3
RNF217Q8TC41 AC079178.1-201ENST00000420915 656 ntBASIC13.15□□□□□ -0.3
RNF217Q8TC41 AL157407.1-201ENST00000435784 904 ntBASIC13.15□□□□□ -0.3
RNF217Q8TC41 AL645933.1-201ENST00000440087 609 ntBASIC13.15□□□□□ -0.3
RNF217Q8TC41 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC13.15□□□□□ -0.3
RNF217Q8TC41 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
RNF217Q8TC41 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC13.15□□□□□ -0.3
RNF217Q8TC41 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC13.15□□□□□ -0.3
RNF217Q8TC41 AC021723.1-201ENST00000486306 515 ntBASIC13.15□□□□□ -0.3
RNF217Q8TC41 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RNF217Q8TC41 HTR4-207ENST00000520514 1236 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RNF217Q8TC41 AC114550.1-202ENST00000522661 643 ntTSL 2 BASIC13.15□□□□□ -0.3
RNF217Q8TC41 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC13.15□□□□□ -0.3
RNF217Q8TC41 AC007216.2-201ENST00000562802 384 ntTSL 3 BASIC13.15□□□□□ -0.3
RNF217Q8TC41 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.15□□□□□ -0.3
RNF217Q8TC41 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
RNF217Q8TC41 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC13.15□□□□□ -0.3
RNF217Q8TC41 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC13.15□□□□□ -0.3
RNF217Q8TC41 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC13.15□□□□□ -0.3
RNF217Q8TC41 HIST1H3G-201ENST00000614378 2411 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
RNF217Q8TC41 SH3BP2-203ENST00000442312 9211 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
RNF217Q8TC41 PI4KAP2-201ENST00000360806 2080 ntBASIC13.15□□□□□ -0.3
RNF217Q8TC41 ZFYVE19-209ENST00000564258 2059 ntTSL 2 BASIC13.15□□□□□ -0.3
RNF217Q8TC41 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC13.15□□□□□ -0.3
RNF217Q8TC41 FAM161A-203ENST00000405894 3684 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
RNF217Q8TC41 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC13.15□□□□□ -0.3
RNF217Q8TC41 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
RNF217Q8TC41 CLCN4-203ENST00000421085 6534 ntTSL 5 BASIC13.15□□□□□ -0.3
RNF217Q8TC41 LINC01987-201ENST00000593118 2281 ntTSL 2 BASIC13.15□□□□□ -0.3
RNF217Q8TC41 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC13.15□□□□□ -0.3
RNF217Q8TC41 PRKN-206ENST00000366898 4180 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RNF217Q8TC41 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RNF217Q8TC41 COPS8-201ENST00000354371 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RNF217Q8TC41 DGCR5-203ENST00000438934 5492 ntTSL 5 BASIC13.15□□□□□ -0.3
RNF217Q8TC41 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
RNF217Q8TC41 ATIC-201ENST00000236959 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
RNF217Q8TC41 LINC00473-205ENST00000584911 2212 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
RNF217Q8TC41 ATP6V1B1-201ENST00000234396 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RNF217Q8TC41 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RNF217Q8TC41 GEMIN5-201ENST00000285873 5397 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RNF217Q8TC41 SLC7A1-201ENST00000380752 7347 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RNF217Q8TC41 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
RNF217Q8TC41 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RNF217Q8TC41 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RNF217Q8TC41 TSPAN9-201ENST00000011898 4323 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RNF217Q8TC41 HDAC5-204ENST00000586802 3662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RNF217Q8TC41 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC13.14□□□□□ -0.31
RNF217Q8TC41 CACNA1C-204ENST00000347598 6655 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
RNF217Q8TC41 DAG1-218ENST00000515359 5576 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
RNF217Q8TC41 GRPEL1-201ENST00000264954 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RNF217Q8TC41 INSC-201ENST00000379554 2954 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
RNF217Q8TC41 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
RNF217Q8TC41 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC13.14□□□□□ -0.31
RNF217Q8TC41 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC13.14□□□□□ -0.31
RNF217Q8TC41 U91328.1-201ENST00000437528 223 ntBASIC13.14□□□□□ -0.31
RNF217Q8TC41 AC007274.1-201ENST00000439805 662 ntBASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms