Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 AC007608.2-201ENST00000569940 1146 ntTSL 3 BASIC16.3■□□□□ 0.2
PDE6BP35913 ALOX12P1-201ENST00000579299 1229 ntBASIC16.3■□□□□ 0.2
PDE6BP35913 OR4C3-202ENST00000611380 597 ntBASIC16.3■□□□□ 0.2
PDE6BP35913 AL591926.3-201ENST00000611630 238 ntBASIC16.3■□□□□ 0.2
PDE6BP35913 RBP1-206ENST00000617459 667 ntTSL 2 BASIC16.3■□□□□ 0.2
PDE6BP35913 C2orf27AP1-201ENST00000618128 586 ntBASIC16.3■□□□□ 0.2
PDE6BP35913 LINC00923-208ENST00000621777 503 ntTSL 5 BASIC16.3■□□□□ 0.2
PDE6BP35913 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDE6BP35913 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PDE6BP35913 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDE6BP35913 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC16.3■□□□□ 0.2
PDE6BP35913 PRR3-201ENST00000376557 1797 ntTSL 2 BASIC16.3■□□□□ 0.2
PDE6BP35913 LILRB4-205ENST00000430952 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDE6BP35913 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC16.3■□□□□ 0.2
PDE6BP35913 AC005089.1-201ENST00000619486 2241 ntBASIC16.3■□□□□ 0.2
PDE6BP35913 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDE6BP35913 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PDE6BP35913 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC16.3■□□□□ 0.2
PDE6BP35913 AC073488.1-201ENST00000416620 1600 ntBASIC16.3■□□□□ 0.2
PDE6BP35913 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
PDE6BP35913 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDE6BP35913 STX3-207ENST00000633708 3111 ntTSL 5 BASIC16.3■□□□□ 0.2
PDE6BP35913 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PDE6BP35913 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDE6BP35913 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC16.29■□□□□ 0.2
PDE6BP35913 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC16.29■□□□□ 0.2
PDE6BP35913 AC005840.4-201ENST00000541242 2494 ntBASIC16.29■□□□□ 0.2
PDE6BP35913 AC111170.3-201ENST00000624282 2464 ntBASIC16.29■□□□□ 0.2
PDE6BP35913 SDR16C5-203ENST00000522671 1988 ntTSL 2 BASIC16.29■□□□□ 0.2
PDE6BP35913 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDE6BP35913 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDE6BP35913 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDE6BP35913 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC16.29■□□□□ 0.2
PDE6BP35913 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDE6BP35913 CFAP20-201ENST00000262498 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDE6BP35913 CDCA7L-202ENST00000373934 1830 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
PDE6BP35913 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDE6BP35913 SLC26A5-201ENST00000306312 2689 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDE6BP35913 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
PDE6BP35913 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC16.29■□□□□ 0.2
PDE6BP35913 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PDE6BP35913 GRK6P1-201ENST00000400595 1711 ntBASIC16.29■□□□□ 0.2
PDE6BP35913 HRASLS2-201ENST00000255695 742 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PDE6BP35913 TPT1-201ENST00000309246 1008 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PDE6BP35913 HIGD2B-201ENST00000311755 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDE6BP35913 AP000487.2-201ENST00000324630 394 ntTSL 3 BASIC16.29■□□□□ 0.2
PDE6BP35913 TFAM-201ENST00000373895 973 ntTSL 2 BASIC16.29■□□□□ 0.2
PDE6BP35913 SUMO1-202ENST00000392245 1071 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
PDE6BP35913 LIMS2-203ENST00000409254 867 ntTSL 3 BASIC16.29■□□□□ 0.2
PDE6BP35913 AC234771.1-201ENST00000416873 250 ntTSL 2 BASIC16.29■□□□□ 0.2
PDE6BP35913 AC000078.1-201ENST00000420617 682 ntBASIC16.29■□□□□ 0.2
PDE6BP35913 AC131235.2-201ENST00000445553 1057 ntBASIC16.29■□□□□ 0.2
PDE6BP35913 VTI1BP1-201ENST00000486325 700 ntBASIC16.29■□□□□ 0.2
PDE6BP35913 AC007728.1-202ENST00000564510 787 ntTSL 3 BASIC16.29■□□□□ 0.2
PDE6BP35913 RN7SL678P-201ENST00000579533 299 ntBASIC16.29■□□□□ 0.2
PDE6BP35913 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDE6BP35913 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDE6BP35913 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDE6BP35913 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC16.29■□□□□ 0.2
PDE6BP35913 AGAP10P-201ENST00000454844 2418 ntBASIC16.29■□□□□ 0.2
PDE6BP35913 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDE6BP35913 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDE6BP35913 IKZF3-211ENST00000394189 1552 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PDE6BP35913 TK2-221ENST00000620035 5060 ntTSL 2 BASIC16.29■□□□□ 0.2
PDE6BP35913 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDE6BP35913 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDE6BP35913 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDE6BP35913 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDE6BP35913 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDE6BP35913 ZNF114-201ENST00000315849 2206 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PDE6BP35913 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC16.29■□□□□ 0.2
PDE6BP35913 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
PDE6BP35913 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PDE6BP35913 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDE6BP35913 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PDE6BP35913 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PDE6BP35913 FARS2-201ENST00000274680 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDE6BP35913 IP6K2-221ENST00000449610 1673 ntTSL 2 BASIC16.28■□□□□ 0.2
PDE6BP35913 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDE6BP35913 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDE6BP35913 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDE6BP35913 OR8J1-202ENST00000533152 1320 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
PDE6BP35913 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PDE6BP35913 CPPED1-203ENST00000433677 1993 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PDE6BP35913 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC16.28■□□□□ 0.2
PDE6BP35913 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDE6BP35913 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC16.28■□□□□ 0.2
PDE6BP35913 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDE6BP35913 SMIM4-201ENST00000307106 274 ntTSL 2 BASIC16.28■□□□□ 0.2
PDE6BP35913 PRDX1-202ENST00000319248 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDE6BP35913 UGT1A6-202ENST00000373424 1128 ntTSL 2 BASIC16.28■□□□□ 0.2
PDE6BP35913 SNAP25-AS1-202ENST00000426491 804 ntTSL 5 BASIC16.28■□□□□ 0.2
PDE6BP35913 AL161644.1-201ENST00000426901 1111 ntTSL 2 BASIC16.28■□□□□ 0.2
PDE6BP35913 TGFA-207ENST00000450929 950 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PDE6BP35913 VEGFA-210ENST00000457104 414 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PDE6BP35913 RN7SL111P-201ENST00000468841 285 ntBASIC16.28■□□□□ 0.2
PDE6BP35913 LRRC75A-AS1-208ENST00000480811 968 ntTSL 2 BASIC16.28■□□□□ 0.2
PDE6BP35913 ASS1P9-201ENST00000513426 1236 ntBASIC16.28■□□□□ 0.2
PDE6BP35913 VEGFA-218ENST00000518689 630 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PDE6BP35913 WISP1-205ENST00000519433 545 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms