Protein–RNA interactions for Protein: F8W1W9

NPIPB9, Nuclear pore complex-interacting protein family member B9, humanhuman

Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB9F8W1W9 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC12.23□□□□□ -0.45
NPIPB9F8W1W9 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC12.23□□□□□ -0.45
NPIPB9F8W1W9 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NPIPB9F8W1W9 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC12.23□□□□□ -0.45
NPIPB9F8W1W9 TNFSF8-201ENST00000223795 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NPIPB9F8W1W9 RUSC1-AS1-202ENST00000446880 1836 ntTSL 2 BASIC12.23□□□□□ -0.45
NPIPB9F8W1W9 HAO1-201ENST00000378789 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NPIPB9F8W1W9 MAGEC3-205ENST00000544766 1707 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
NPIPB9F8W1W9 RBPJ-203ENST00000345843 1682 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
NPIPB9F8W1W9 NUSAP1-208ENST00000559596 1629 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
NPIPB9F8W1W9 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC12.23□□□□□ -0.45
NPIPB9F8W1W9 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NPIPB9F8W1W9 C1QTNF6-201ENST00000337843 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NPIPB9F8W1W9 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NPIPB9F8W1W9 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
NPIPB9F8W1W9 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NPIPB9F8W1W9 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
NPIPB9F8W1W9 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
NPIPB9F8W1W9 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC12.23□□□□□ -0.45
NPIPB9F8W1W9 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC12.23□□□□□ -0.45
NPIPB9F8W1W9 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC12.23□□□□□ -0.45
NPIPB9F8W1W9 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
NPIPB9F8W1W9 CXXC1P1-202ENST00000489409 1212 ntBASIC12.23□□□□□ -0.45
NPIPB9F8W1W9 AC008026.2-201ENST00000495438 348 ntBASIC12.23□□□□□ -0.45
NPIPB9F8W1W9 TOB1-AS1-202ENST00000514358 690 ntTSL 5 BASIC12.23□□□□□ -0.45
NPIPB9F8W1W9 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC12.23□□□□□ -0.45
NPIPB9F8W1W9 AP003071.1-201ENST00000567925 622 ntTSL 3 BASIC12.23□□□□□ -0.45
NPIPB9F8W1W9 BLVRB-202ENST00000595483 649 ntTSL 2 BASIC12.23□□□□□ -0.45
NPIPB9F8W1W9 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC12.23□□□□□ -0.45
NPIPB9F8W1W9 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC12.23□□□□□ -0.45
NPIPB9F8W1W9 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC12.23□□□□□ -0.45
NPIPB9F8W1W9 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC12.23□□□□□ -0.45
NPIPB9F8W1W9 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NPIPB9F8W1W9 CICP1-201ENST00000416803 2410 ntBASIC12.23□□□□□ -0.45
NPIPB9F8W1W9 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NPIPB9F8W1W9 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
NPIPB9F8W1W9 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
NPIPB9F8W1W9 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
NPIPB9F8W1W9 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
NPIPB9F8W1W9 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
NPIPB9F8W1W9 ZNF143-203ENST00000396602 2947 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
NPIPB9F8W1W9 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
NPIPB9F8W1W9 GLYR1-212ENST00000591451 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NPIPB9F8W1W9 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NPIPB9F8W1W9 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NPIPB9F8W1W9 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC12.22□□□□□ -0.45
NPIPB9F8W1W9 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NPIPB9F8W1W9 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NPIPB9F8W1W9 GLT6D1-201ENST00000371763 1526 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
NPIPB9F8W1W9 GLT6D1-202ENST00000613244 1523 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
NPIPB9F8W1W9 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NPIPB9F8W1W9 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NPIPB9F8W1W9 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC12.22□□□□□ -0.45
NPIPB9F8W1W9 TBC1D3F-201ENST00000620210 2117 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
NPIPB9F8W1W9 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC12.22□□□□□ -0.45
NPIPB9F8W1W9 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
NPIPB9F8W1W9 ZCWPW1-208ENST00000490721 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
NPIPB9F8W1W9 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NPIPB9F8W1W9 CTBP2P8-201ENST00000422584 1330 ntBASIC12.22□□□□□ -0.45
NPIPB9F8W1W9 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NPIPB9F8W1W9 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
NPIPB9F8W1W9 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NPIPB9F8W1W9 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NPIPB9F8W1W9 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC12.22□□□□□ -0.45
NPIPB9F8W1W9 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
NPIPB9F8W1W9 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NPIPB9F8W1W9 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NPIPB9F8W1W9 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NPIPB9F8W1W9 RN7SKP255-201ENST00000363442 313 ntBASIC12.22□□□□□ -0.45
NPIPB9F8W1W9 RN7SKP203-201ENST00000363618 332 ntBASIC12.22□□□□□ -0.45
NPIPB9F8W1W9 RN7SKP71-201ENST00000364558 318 ntBASIC12.22□□□□□ -0.45
NPIPB9F8W1W9 7SK.1-201ENST00000365328 331 ntBASIC12.22□□□□□ -0.45
NPIPB9F8W1W9 DPPA5-201ENST00000370370 679 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NPIPB9F8W1W9 SNORA50D-201ENST00000408059 134 ntBASIC12.22□□□□□ -0.45
NPIPB9F8W1W9 GGCT-203ENST00000409144 836 ntTSL 2 BASIC12.22□□□□□ -0.45
NPIPB9F8W1W9 AC105935.1-203ENST00000419183 600 ntTSL 3 BASIC12.22□□□□□ -0.45
NPIPB9F8W1W9 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC12.22□□□□□ -0.45
NPIPB9F8W1W9 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC12.22□□□□□ -0.45
NPIPB9F8W1W9 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC12.22□□□□□ -0.45
NPIPB9F8W1W9 VTI1BP1-201ENST00000486325 700 ntBASIC12.22□□□□□ -0.45
NPIPB9F8W1W9 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC12.22□□□□□ -0.45
NPIPB9F8W1W9 TBC1D3P6-201ENST00000505954 962 ntBASIC12.22□□□□□ -0.45
NPIPB9F8W1W9 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NPIPB9F8W1W9 AC131009.2-201ENST00000542763 770 ntTSL 3 BASIC12.22□□□□□ -0.45
NPIPB9F8W1W9 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC12.22□□□□□ -0.45
NPIPB9F8W1W9 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC12.22□□□□□ -0.45
NPIPB9F8W1W9 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC12.22□□□□□ -0.45
NPIPB9F8W1W9 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC12.22□□□□□ -0.45
NPIPB9F8W1W9 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC12.22□□□□□ -0.45
NPIPB9F8W1W9 SNORA50D-202ENST00000627561 132 ntBASIC12.22□□□□□ -0.45
NPIPB9F8W1W9 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC12.22□□□□□ -0.45
NPIPB9F8W1W9 PAX3-205ENST00000392069 3170 ntTSL 5 BASIC12.22□□□□□ -0.45
NPIPB9F8W1W9 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NPIPB9F8W1W9 ZSCAN5C-202ENST00000534327 1892 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
NPIPB9F8W1W9 STK24-201ENST00000376547 2492 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
NPIPB9F8W1W9 SH2D3C-202ENST00000373276 3051 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NPIPB9F8W1W9 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NPIPB9F8W1W9 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC12.22□□□□□ -0.45
NPIPB9F8W1W9 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NPIPB9F8W1W9 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms