Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SATB2Q9UPW6 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
SATB2Q9UPW6 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SATB2Q9UPW6 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SATB2Q9UPW6 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SATB2Q9UPW6 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SATB2Q9UPW6 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC13.3□□□□□ -0.28
SATB2Q9UPW6 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SATB2Q9UPW6 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC13.3□□□□□ -0.28
SATB2Q9UPW6 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SATB2Q9UPW6 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC13.3□□□□□ -0.28
SATB2Q9UPW6 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC13.3□□□□□ -0.28
SATB2Q9UPW6 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC13.3□□□□□ -0.28
SATB2Q9UPW6 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC13.3□□□□□ -0.28
SATB2Q9UPW6 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC13.3□□□□□ -0.28
SATB2Q9UPW6 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC13.3□□□□□ -0.28
SATB2Q9UPW6 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC13.3□□□□□ -0.28
SATB2Q9UPW6 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SATB2Q9UPW6 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SATB2Q9UPW6 HNRNPA1P5-201ENST00000558213 966 ntBASIC13.3□□□□□ -0.28
SATB2Q9UPW6 AC023968.2-201ENST00000560593 1049 ntBASIC13.3□□□□□ -0.28
SATB2Q9UPW6 MT3-202ENST00000561640 514 ntTSL 3 BASIC13.3□□□□□ -0.28
SATB2Q9UPW6 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC13.3□□□□□ -0.28
SATB2Q9UPW6 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC13.3□□□□□ -0.28
SATB2Q9UPW6 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC13.3□□□□□ -0.28
SATB2Q9UPW6 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC13.3□□□□□ -0.28
SATB2Q9UPW6 RARS-210ENST00000626454 177 ntTSL 5 BASIC13.3□□□□□ -0.28
SATB2Q9UPW6 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC13.3□□□□□ -0.28
SATB2Q9UPW6 EPM2AIP1-201ENST00000322716 8126 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
SATB2Q9UPW6 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SATB2Q9UPW6 ST6GAL2-201ENST00000361686 6857 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SATB2Q9UPW6 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
SATB2Q9UPW6 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SATB2Q9UPW6 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC13.3□□□□□ -0.28
SATB2Q9UPW6 ENPP7P8-202ENST00000527856 1345 ntBASIC13.3□□□□□ -0.28
SATB2Q9UPW6 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SATB2Q9UPW6 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.3□□□□□ -0.28
SATB2Q9UPW6 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
SATB2Q9UPW6 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.3□□□□□ -0.28
SATB2Q9UPW6 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SATB2Q9UPW6 PLSCR4-203ENST00000433593 2839 ntTSL 2 BASIC13.3□□□□□ -0.28
SATB2Q9UPW6 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC13.3□□□□□ -0.28
SATB2Q9UPW6 AC111170.3-201ENST00000624282 2464 ntBASIC13.3□□□□□ -0.28
SATB2Q9UPW6 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SATB2Q9UPW6 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SATB2Q9UPW6 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SATB2Q9UPW6 PDE2A-201ENST00000334456 4315 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
SATB2Q9UPW6 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SATB2Q9UPW6 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SATB2Q9UPW6 SARS-202ENST00000369923 1882 ntTSL 5 BASIC13.29□□□□□ -0.28
SATB2Q9UPW6 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
SATB2Q9UPW6 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
SATB2Q9UPW6 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC13.29□□□□□ -0.28
SATB2Q9UPW6 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
SATB2Q9UPW6 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SATB2Q9UPW6 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SATB2Q9UPW6 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SATB2Q9UPW6 AGAP10P-201ENST00000454844 2418 ntBASIC13.29□□□□□ -0.28
SATB2Q9UPW6 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SATB2Q9UPW6 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SATB2Q9UPW6 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC13.29□□□□□ -0.28
SATB2Q9UPW6 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SATB2Q9UPW6 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SATB2Q9UPW6 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SATB2Q9UPW6 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SATB2Q9UPW6 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
SATB2Q9UPW6 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC13.29□□□□□ -0.28
SATB2Q9UPW6 UROS-201ENST00000368774 744 ntTSL 2 BASIC13.29□□□□□ -0.28
SATB2Q9UPW6 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
SATB2Q9UPW6 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SATB2Q9UPW6 HMGA1P1-201ENST00000415560 1062 ntBASIC13.29□□□□□ -0.28
SATB2Q9UPW6 LINP1-201ENST00000417112 917 ntTSL 2 BASIC13.29□□□□□ -0.28
SATB2Q9UPW6 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC13.29□□□□□ -0.28
SATB2Q9UPW6 GOLGA6L16P-201ENST00000441780 1299 ntBASIC13.29□□□□□ -0.28
SATB2Q9UPW6 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
SATB2Q9UPW6 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC13.29□□□□□ -0.28
SATB2Q9UPW6 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC13.29□□□□□ -0.28
SATB2Q9UPW6 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
SATB2Q9UPW6 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC13.29□□□□□ -0.28
SATB2Q9UPW6 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC13.29□□□□□ -0.28
SATB2Q9UPW6 AL136982.5-201ENST00000605222 294 ntBASIC13.29□□□□□ -0.28
SATB2Q9UPW6 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC13.29□□□□□ -0.28
SATB2Q9UPW6 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC13.29□□□□□ -0.28
SATB2Q9UPW6 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC13.29□□□□□ -0.28
SATB2Q9UPW6 CASP16P-204ENST00000635032 809 ntBASIC13.29□□□□□ -0.28
SATB2Q9UPW6 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC13.29□□□□□ -0.28
SATB2Q9UPW6 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
SATB2Q9UPW6 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SATB2Q9UPW6 AL590824.1-201ENST00000403828 1349 ntBASIC13.29□□□□□ -0.28
SATB2Q9UPW6 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
SATB2Q9UPW6 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SATB2Q9UPW6 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC13.29□□□□□ -0.28
SATB2Q9UPW6 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
SATB2Q9UPW6 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SATB2Q9UPW6 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SATB2Q9UPW6 EHD1-201ENST00000320631 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SATB2Q9UPW6 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SATB2Q9UPW6 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
SATB2Q9UPW6 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SATB2Q9UPW6 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms