Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 STRA6-201ENST00000323940 2864 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
NICN1Q9BSH3 SPATA2-202ENST00000422556 4138 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
NICN1Q9BSH3 ABL2-210ENST00000511413 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
NICN1Q9BSH3 LINC01024-201ENST00000499203 2769 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
NICN1Q9BSH3 ZMIZ2-215ENST00000615423 2772 ntTSL 5 BASIC11.59□□□□□ -0.55
NICN1Q9BSH3 GLIPR2-202ENST00000377960 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NICN1Q9BSH3 PLCXD1-201ENST00000381657 5507 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
NICN1Q9BSH3 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC11.59□□□□□ -0.55
NICN1Q9BSH3 TRPC7-201ENST00000352189 2241 ntTSL 5 BASIC11.59□□□□□ -0.55
NICN1Q9BSH3 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
NICN1Q9BSH3 FTO-214ENST00000636218 2227 ntTSL 5 BASIC11.59□□□□□ -0.55
NICN1Q9BSH3 SLC7A9-201ENST00000023064 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NICN1Q9BSH3 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
NICN1Q9BSH3 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
NICN1Q9BSH3 GRM4-209ENST00000609222 3176 ntTSL 2 BASIC11.59□□□□□ -0.55
NICN1Q9BSH3 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC11.59□□□□□ -0.55
NICN1Q9BSH3 PLEKHM1P1-205ENST00000582986 5014 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
NICN1Q9BSH3 BOLL-201ENST00000282278 2742 ntTSL 2 BASIC11.59□□□□□ -0.55
NICN1Q9BSH3 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
NICN1Q9BSH3 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
NICN1Q9BSH3 PITPNM3-202ENST00000421306 6945 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.55
NICN1Q9BSH3 THSD1-201ENST00000258613 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
NICN1Q9BSH3 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
NICN1Q9BSH3 AL135960.1-201ENST00000422216 4036 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
NICN1Q9BSH3 UGT3A1-203ENST00000503189 1902 ntTSL 2 BASIC11.58□□□□□ -0.55
NICN1Q9BSH3 MAGEL2-201ENST00000532292 4298 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
NICN1Q9BSH3 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
NICN1Q9BSH3 AC022098.1-201ENST00000588387 2861 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
NICN1Q9BSH3 ARMCX6-201ENST00000361910 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
NICN1Q9BSH3 MKL1-212ENST00000618417 1842 ntTSL 5 BASIC11.58□□□□□ -0.56
NICN1Q9BSH3 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC11.58□□□□□ -0.56
NICN1Q9BSH3 LRPPRC-201ENST00000260665 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
NICN1Q9BSH3 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
NICN1Q9BSH3 NPAP1-201ENST00000329468 7526 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
NICN1Q9BSH3 ATP13A2-203ENST00000452699 3981 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
NICN1Q9BSH3 TMX1-201ENST00000457354 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
NICN1Q9BSH3 HMGB1-202ENST00000339872 2319 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
NICN1Q9BSH3 CPT1C-203ENST00000392518 2910 ntAPPRIS P3 TSL 2 BASIC11.58□□□□□ -0.56
NICN1Q9BSH3 AC006033.2-201ENST00000609522 1968 ntTSL 2 BASIC11.58□□□□□ -0.56
NICN1Q9BSH3 AL356130.1-201ENST00000620188 1965 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
NICN1Q9BSH3 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
NICN1Q9BSH3 LRTM2-201ENST00000299194 3688 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
NICN1Q9BSH3 CAST-206ENST00000395812 4506 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
NICN1Q9BSH3 OR1I1-202ENST00000641398 5984 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
NICN1Q9BSH3 NDUFAF6-201ENST00000396111 1869 ntTSL 5 BASIC11.58□□□□□ -0.56
NICN1Q9BSH3 FAM230B-208ENST00000451257 3566 ntTSL 5 BASIC11.58□□□□□ -0.56
NICN1Q9BSH3 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
NICN1Q9BSH3 MIR645-201ENST00000385283 94 ntBASIC11.58□□□□□ -0.56
NICN1Q9BSH3 AL627231.1-201ENST00000394467 1125 ntBASIC11.58□□□□□ -0.56
NICN1Q9BSH3 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC11.58□□□□□ -0.56
NICN1Q9BSH3 AL035633.1-201ENST00000406139 838 ntBASIC11.58□□□□□ -0.56
NICN1Q9BSH3 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC11.58□□□□□ -0.56
NICN1Q9BSH3 AC005077.3-201ENST00000449614 213 ntBASIC11.58□□□□□ -0.56
NICN1Q9BSH3 GAPDHP21-201ENST00000450301 1010 ntBASIC11.58□□□□□ -0.56
NICN1Q9BSH3 COX20P2-201ENST00000452636 358 ntBASIC11.58□□□□□ -0.56
NICN1Q9BSH3 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC11.58□□□□□ -0.56
NICN1Q9BSH3 SYT17-208ENST00000568433 812 ntTSL 3 BASIC11.58□□□□□ -0.56
NICN1Q9BSH3 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC11.58□□□□□ -0.56
NICN1Q9BSH3 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC11.58□□□□□ -0.56
NICN1Q9BSH3 AL049840.2-201ENST00000602722 535 ntBASIC11.58□□□□□ -0.56
NICN1Q9BSH3 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
NICN1Q9BSH3 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
NICN1Q9BSH3 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
NICN1Q9BSH3 KIF13A-201ENST00000259711 5941 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
NICN1Q9BSH3 POTEI-201ENST00000451531 7020 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
NICN1Q9BSH3 USB1-207ENST00000563149 1751 ntTSL 2 BASIC11.58□□□□□ -0.56
NICN1Q9BSH3 GNG4-204ENST00000450593 4978 ntAPPRIS P1 TSL 4 BASIC11.58□□□□□ -0.56
NICN1Q9BSH3 MAX-212ENST00000555932 1673 ntTSL 5 BASIC11.58□□□□□ -0.56
NICN1Q9BSH3 CAST-223ENST00000508608 2425 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
NICN1Q9BSH3 NR4A1-201ENST00000243050 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
NICN1Q9BSH3 DLGAP2-201ENST00000421627 3165 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
NICN1Q9BSH3 DLGAP2-214ENST00000612087 10088 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
NICN1Q9BSH3 PHF21B-203ENST00000403565 3586 ntTSL 2 BASIC11.58□□□□□ -0.56
NICN1Q9BSH3 DYRK4-214ENST00000543431 2068 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
NICN1Q9BSH3 AL449403.1-201ENST00000432783 1577 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
NICN1Q9BSH3 FRMPD2B-201ENST00000431305 1347 ntBASIC11.58□□□□□ -0.56
NICN1Q9BSH3 CAD-201ENST00000264705 7265 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
NICN1Q9BSH3 ZNF701-204ENST00000540331 5538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
NICN1Q9BSH3 ERI1-209ENST00000523898 5036 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
NICN1Q9BSH3 POMT1-203ENST00000372228 3123 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
NICN1Q9BSH3 MAML3-203ENST00000509479 6844 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
NICN1Q9BSH3 LOXL3-204ENST00000409549 2897 ntTSL 2 BASIC11.57□□□□□ -0.56
NICN1Q9BSH3 AC138028.6-201ENST00000616106 1482 ntBASIC11.57□□□□□ -0.56
NICN1Q9BSH3 COL8A1-202ENST00000273342 3029 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
NICN1Q9BSH3 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC11.57□□□□□ -0.56
NICN1Q9BSH3 HNRNPL-210ENST00000600873 1633 ntTSL 5 BASIC11.57□□□□□ -0.56
NICN1Q9BSH3 FOSB-203ENST00000443841 3346 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
NICN1Q9BSH3 RALGAPB-203ENST00000397042 8652 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
NICN1Q9BSH3 SH3KBP1-202ENST00000379698 2678 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
NICN1Q9BSH3 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
NICN1Q9BSH3 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
NICN1Q9BSH3 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC11.57□□□□□ -0.56
NICN1Q9BSH3 AFG3L2P1-201ENST00000521792 1763 ntBASIC11.57□□□□□ -0.56
NICN1Q9BSH3 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
NICN1Q9BSH3 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC11.57□□□□□ -0.56
NICN1Q9BSH3 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
NICN1Q9BSH3 PDZRN3-205ENST00000466780 2737 ntTSL 2 BASIC11.57□□□□□ -0.56
NICN1Q9BSH3 SRRM2-AS1-201ENST00000382313 3523 ntTSL 2 BASIC11.57□□□□□ -0.56
NICN1Q9BSH3 MYO1D-206ENST00000579584 3500 ntTSL 2 BASIC11.57□□□□□ -0.56
NICN1Q9BSH3 CST3-203ENST00000398411 3286 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms