Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 ADGRG5-207ENST00000615867 762 ntTSL 4 BASIC8.55□□□□□ -1.04
VPS13DQ5THJ4 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
VPS13DQ5THJ4 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
VPS13DQ5THJ4 HMBS-202ENST00000392841 1411 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
VPS13DQ5THJ4 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
VPS13DQ5THJ4 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC8.55□□□□□ -1.04
VPS13DQ5THJ4 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
VPS13DQ5THJ4 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
VPS13DQ5THJ4 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC8.55□□□□□ -1.04
VPS13DQ5THJ4 PCDHB6-201ENST00000231136 3266 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
VPS13DQ5THJ4 METTL5-203ENST00000392640 800 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
VPS13DQ5THJ4 AC083873.1-201ENST00000421179 1099 ntBASIC8.55□□□□□ -1.04
VPS13DQ5THJ4 DIO2-206ENST00000555750 1049 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
VPS13DQ5THJ4 AC013489.2-201ENST00000558732 276 ntBASIC8.55□□□□□ -1.04
VPS13DQ5THJ4 AC133548.2-202ENST00000562267 148 ntBASIC8.55□□□□□ -1.04
VPS13DQ5THJ4 AC011773.4-202ENST00000566000 1264 ntBASIC8.55□□□□□ -1.04
VPS13DQ5THJ4 AFMID-210ENST00000589256 578 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
VPS13DQ5THJ4 ASMTL-AS1-205ENST00000602357 435 ntTSL 2 BASIC8.55□□□□□ -1.04
VPS13DQ5THJ4 AL355102.3-201ENST00000554299 1678 ntBASIC8.55□□□□□ -1.04
VPS13DQ5THJ4 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC8.55□□□□□ -1.04
VPS13DQ5THJ4 SNHG14-218ENST00000553108 2208 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
VPS13DQ5THJ4 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC8.55□□□□□ -1.04
VPS13DQ5THJ4 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
VPS13DQ5THJ4 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC8.55□□□□□ -1.04
VPS13DQ5THJ4 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
VPS13DQ5THJ4 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
VPS13DQ5THJ4 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC8.55□□□□□ -1.04
VPS13DQ5THJ4 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC8.55□□□□□ -1.04
VPS13DQ5THJ4 MLX-203ENST00000435881 2428 ntAPPRIS ALT1 TSL 1 (best) BASIC8.55□□□□□ -1.04
VPS13DQ5THJ4 AGAP12P-202ENST00000603888 2141 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
VPS13DQ5THJ4 NFIX-201ENST00000358552 1727 ntTSL 5 BASIC8.55□□□□□ -1.04
VPS13DQ5THJ4 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 CSMD2-202ENST00000338325 1544 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 PDPN-210ENST00000513143 1305 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 CACNG1-201ENST00000226021 1266 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 SOX2-OT-201ENST00000460739 609 ntTSL 4 BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 LINC01324-202ENST00000497379 838 ntTSL 5 BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 SLC16A14P1-201ENST00000506846 1117 ntBASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 AC016924.1-201ENST00000511512 501 ntTSL 3 BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 AP3M2-205ENST00000517922 1094 ntTSL 2 BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 IGLVI-63-201ENST00000524184 384 ntBASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 RPL38-206ENST00000533498 532 ntAPPRIS P2 TSL 2 BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 AC073655.1-201ENST00000550111 493 ntTSL 3 BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 AC011444.2-201ENST00000587759 567 ntTSL 4 BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 ARSF-201ENST00000359361 1991 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 RCBTB2-206ENST00000544904 2984 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 CCDC144NL-AS1-216ENST00000582583 1670 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 OR6F1-203ENST00000641444 1698 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 TUBD1-203ENST00000346141 1490 ntTSL 2 BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 IGF2BP1-202ENST00000431824 1317 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 BX571846.1-201ENST00000447347 553 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 AL589674.1-201ENST00000454401 222 ntTSL 5 BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 MYOZ3-205ENST00000520112 605 ntTSL 4 BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 DCUN1D3-202ENST00000563934 1996 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 PRPSAP2-228ENST00000610773 1905 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 LILRA6-203ENST00000396365 1890 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 RHOH-222ENST00000617441 1872 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 GABRR2-201ENST00000402938 1682 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 AL109618.1-201ENST00000434910 1683 ntBASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 IL18BP-202ENST00000337131 1606 ntAPPRIS P2 TSL 5 BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 SLC9A3P3-201ENST00000457608 2229 ntBASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 APOC2-201ENST00000252490 727 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 OR4C46-201ENST00000328188 930 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 TREM2-201ENST00000338469 860 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 SRSF10-205ENST00000374452 1194 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 AL356414.1-201ENST00000379526 686 ntTSL 3 BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 MAPT-207ENST00000420682 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 MAPT-208ENST00000431008 1233 ntTSL 5 BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 RN7SL454P-201ENST00000492744 243 ntBASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 AC027237.4-201ENST00000560870 694 ntTSL 3 BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 AC116553.1-201ENST00000561752 397 ntBASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 TMEM205-204ENST00000586218 593 ntTSL 2 BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 AL590096.1-202ENST00000618162 580 ntTSL 3 BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 SERINC4-201ENST00000299969 2318 ntTSL 5 BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC8.54□□□□□ -1.04
VPS13DQ5THJ4 PRAMENP-203ENST00000548391 1445 ntBASIC8.54□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms