Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 LIG1-201ENST00000263274 3384 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 HMGB1-202ENST00000339872 2319 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 LEPR-201ENST00000344610 2935 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 HOXA1-202ENST00000355633 2016 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 MIR661-201ENST00000384842 89 ntBASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 GBP1P1-201ENST00000394662 1740 ntBASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 FMO1-203ENST00000402921 2003 ntTSL 2 BASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 SYBU-203ENST00000408889 2776 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 SPOCK3-207ENST00000504953 2900 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 AC005740.1-201ENST00000515639 522 ntBASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 SCARNA21-201ENST00000517026 139 ntBASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 ZC2HC1C-203ENST00000524913 4283 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 AC190387.1-201ENST00000551683 408 ntBASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 AC015936.2-201ENST00000593177 259 ntBASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 AC233724.13-201ENST00000598383 410 ntBASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 GEMIN5-201ENST00000285873 5397 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 SGSM1-201ENST00000400358 6643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 ERVK13-1-205ENST00000568395 5578 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 ACADL-201ENST00000233710 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 EIF5-205ENST00000558506 4384 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 HIST1H2BH-201ENST00000619466 2060 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 TXNRD1-201ENST00000354940 4082 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 DDC-201ENST00000357936 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 PCDHB7-201ENST00000231137 3765 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 DDX19B-208ENST00000563392 1760 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 MADD-201ENST00000311027 5990 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 KRT8P43-201ENST00000406052 1458 ntBASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 CUL2-210ENST00000626172 4115 ntTSL 5 BASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 LINC01471-201ENST00000461398 3079 ntTSL 5 BASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 CPPED1-202ENST00000381774 6273 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 RECQL5-204ENST00000423245 3576 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
RCL1Q9Y2P8 CTRC-201ENST00000375943 3147 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
RCL1Q9Y2P8 AC120114.4-201ENST00000623731 2194 ntBASIC11.04□□□□□ -0.64
RCL1Q9Y2P8 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RCL1Q9Y2P8 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RCL1Q9Y2P8 RPH3A-202ENST00000415485 4452 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
RCL1Q9Y2P8 ANGEL2-208ENST00000535388 2517 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
RCL1Q9Y2P8 DAND5-201ENST00000317060 1877 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RCL1Q9Y2P8 CRHR1-206ENST00000398285 2399 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
RCL1Q9Y2P8 CACNB3-204ENST00000547230 2395 ntTSL 3 BASIC11.04□□□□□ -0.64
RCL1Q9Y2P8 DYNC1I1-204ENST00000437599 2895 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
RCL1Q9Y2P8 CPSF6-201ENST00000266679 2229 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
RCL1Q9Y2P8 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RCL1Q9Y2P8 LINC00442-202ENST00000456737 2063 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
RCL1Q9Y2P8 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
RCL1Q9Y2P8 SLC4A9-201ENST00000432095 3086 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
RCL1Q9Y2P8 ATAD2-201ENST00000287394 5565 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RCL1Q9Y2P8 ZNF407-201ENST00000299687 7948 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
RCL1Q9Y2P8 SPTY2D1-201ENST00000336349 5754 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RCL1Q9Y2P8 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
RCL1Q9Y2P8 APOL2-203ENST00000451256 1421 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
RCL1Q9Y2P8 LINC01987-201ENST00000593118 2281 ntTSL 2 BASIC11.04□□□□□ -0.64
RCL1Q9Y2P8 ARMC9-215ENST00000614261 4975 ntTSL 5 BASIC11.04□□□□□ -0.64
RCL1Q9Y2P8 HSD3B2-206ENST00000543831 1783 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
RCL1Q9Y2P8 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RCL1Q9Y2P8 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC11.04□□□□□ -0.64
RCL1Q9Y2P8 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RCL1Q9Y2P8 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC11.04□□□□□ -0.64
RCL1Q9Y2P8 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
RCL1Q9Y2P8 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC11.04□□□□□ -0.64
RCL1Q9Y2P8 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC11.04□□□□□ -0.64
RCL1Q9Y2P8 TTTY23B-201ENST00000442790 549 ntBASIC11.04□□□□□ -0.64
RCL1Q9Y2P8 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC11.04□□□□□ -0.64
RCL1Q9Y2P8 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
RCL1Q9Y2P8 AC007389.4-201ENST00000454674 793 ntBASIC11.04□□□□□ -0.64
RCL1Q9Y2P8 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC11.04□□□□□ -0.64
RCL1Q9Y2P8 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC11.04□□□□□ -0.64
RCL1Q9Y2P8 SLC25A15P3-201ENST00000505530 290 ntBASIC11.04□□□□□ -0.64
RCL1Q9Y2P8 AC106794.1-201ENST00000506935 792 ntBASIC11.04□□□□□ -0.64
RCL1Q9Y2P8 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
RCL1Q9Y2P8 POLD4-211ENST00000539074 714 ntTSL 3 BASIC11.04□□□□□ -0.64
RCL1Q9Y2P8 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
RCL1Q9Y2P8 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC11.04□□□□□ -0.64
RCL1Q9Y2P8 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
RCL1Q9Y2P8 AC008805.1-201ENST00000590892 364 ntBASIC11.04□□□□□ -0.64
RCL1Q9Y2P8 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC11.04□□□□□ -0.64
RCL1Q9Y2P8 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms