Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 CEP68-201ENST00000260569 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
RAB40CQ96S21 ZNF287-202ENST00000395825 3208 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RAB40CQ96S21 NLRP2-201ENST00000263437 3496 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
RAB40CQ96S21 SSX2IP-201ENST00000342203 5835 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RAB40CQ96S21 HMGCS1-201ENST00000325110 3506 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RAB40CQ96S21 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RAB40CQ96S21 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RAB40CQ96S21 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
RAB40CQ96S21 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC10.97□□□□□ -0.65
RAB40CQ96S21 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
RAB40CQ96S21 AC078875.1-201ENST00000431907 724 ntBASIC10.97□□□□□ -0.65
RAB40CQ96S21 VDAC1P1-201ENST00000439229 848 ntBASIC10.97□□□□□ -0.65
RAB40CQ96S21 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC10.97□□□□□ -0.65
RAB40CQ96S21 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
RAB40CQ96S21 RN7SL530P-201ENST00000485097 298 ntBASIC10.97□□□□□ -0.65
RAB40CQ96S21 HILS1-202ENST00000545329 423 ntBASIC10.97□□□□□ -0.65
RAB40CQ96S21 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
RAB40CQ96S21 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
RAB40CQ96S21 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
RAB40CQ96S21 AP005482.1-201ENST00000563722 1273 ntBASIC10.97□□□□□ -0.65
RAB40CQ96S21 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
RAB40CQ96S21 AC005324.6-201ENST00000587972 613 ntBASIC10.97□□□□□ -0.65
RAB40CQ96S21 HPN-206ENST00000597419 1212 ntTSL 5 BASIC10.97□□□□□ -0.65
RAB40CQ96S21 AC017083.2-201ENST00000608069 979 ntBASIC10.97□□□□□ -0.65
RAB40CQ96S21 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC10.97□□□□□ -0.65
RAB40CQ96S21 AC133552.6-201ENST00000613406 534 ntBASIC10.97□□□□□ -0.65
RAB40CQ96S21 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
RAB40CQ96S21 GARS-210ENST00000627489 324 ntTSL 4 BASIC10.97□□□□□ -0.65
RAB40CQ96S21 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC10.97□□□□□ -0.65
RAB40CQ96S21 SLC35B4-201ENST00000378509 6797 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RAB40CQ96S21 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
RAB40CQ96S21 RGS3-204ENST00000350696 4387 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
RAB40CQ96S21 COL22A1-203ENST00000435777 4355 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
RAB40CQ96S21 DRD2-204ENST00000538967 1493 ntAPPRIS ALT1 TSL 5 BASIC10.97□□□□□ -0.65
RAB40CQ96S21 RAN-210ENST00000541630 1475 ntTSL 2 BASIC10.97□□□□□ -0.65
RAB40CQ96S21 ZNF318-201ENST00000361428 8006 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
RAB40CQ96S21 TP73-206ENST00000378288 5120 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
RAB40CQ96S21 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RAB40CQ96S21 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
RAB40CQ96S21 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
RAB40CQ96S21 AC139491.6-202ENST00000637171 2077 ntBASIC10.97□□□□□ -0.65
RAB40CQ96S21 DNAI2-201ENST00000311014 2236 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
RAB40CQ96S21 KCNQ3-201ENST00000388996 11510 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
RAB40CQ96S21 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
RAB40CQ96S21 TGM3-201ENST00000381458 2642 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RAB40CQ96S21 CASS4-202ENST00000434344 2888 ntTSL 2 BASIC10.97□□□□□ -0.65
RAB40CQ96S21 UBTF-206ENST00000527034 3010 ntTSL 5 BASIC10.97□□□□□ -0.65
RAB40CQ96S21 CLINT1-201ENST00000411809 3440 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
RAB40CQ96S21 DDAH1-201ENST00000284031 3920 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RAB40CQ96S21 RPH3A-202ENST00000415485 4452 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
RAB40CQ96S21 PLEKHG3-201ENST00000247226 10351 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RAB40CQ96S21 PDE7B-201ENST00000308191 5390 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
RAB40CQ96S21 RIPK4-202ENST00000352483 4016 ntTSL 5 BASIC10.96□□□□□ -0.65
RAB40CQ96S21 SYNJ2-208ENST00000640338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
RAB40CQ96S21 CDCA2-202ENST00000380665 3565 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
RAB40CQ96S21 TRMT2B-202ENST00000372936 3327 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
RAB40CQ96S21 EPS15L1-202ENST00000455140 3266 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
RAB40CQ96S21 SCP2-203ENST00000371514 2811 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
RAB40CQ96S21 HMGB1-202ENST00000339872 2319 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
RAB40CQ96S21 NUP85-201ENST00000245544 2121 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
RAB40CQ96S21 AC020741.1-201ENST00000381217 2079 ntTSL 2 BASIC10.96□□□□□ -0.65
RAB40CQ96S21 AL031666.1-201ENST00000413818 1809 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
RAB40CQ96S21 POPDC2-208ENST00000493094 1837 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
RAB40CQ96S21 DDX19B-208ENST00000563392 1760 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
RAB40CQ96S21 NFIX-201ENST00000358552 1727 ntTSL 5 BASIC10.96□□□□□ -0.65
RAB40CQ96S21 FARS2-201ENST00000274680 1663 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
RAB40CQ96S21 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC10.96□□□□□ -0.65
RAB40CQ96S21 INPP5D-204ENST00000445964 4845 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
RAB40CQ96S21 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
RAB40CQ96S21 SLC6A1-201ENST00000287766 4502 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
RAB40CQ96S21 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
RAB40CQ96S21 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
RAB40CQ96S21 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
RAB40CQ96S21 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
RAB40CQ96S21 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC10.96□□□□□ -0.65
RAB40CQ96S21 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
RAB40CQ96S21 DLEC1-201ENST00000308059 6426 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
RAB40CQ96S21 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
RAB40CQ96S21 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
RAB40CQ96S21 ANKRD19P-201ENST00000338192 862 ntBASIC10.96□□□□□ -0.65
RAB40CQ96S21 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
RAB40CQ96S21 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.65
RAB40CQ96S21 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
RAB40CQ96S21 AL627231.1-201ENST00000394467 1125 ntBASIC10.96□□□□□ -0.65
RAB40CQ96S21 STX1A-203ENST00000395155 783 ntTSL 2 BASIC10.96□□□□□ -0.65
RAB40CQ96S21 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
RAB40CQ96S21 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC10.96□□□□□ -0.65
RAB40CQ96S21 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
RAB40CQ96S21 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC10.96□□□□□ -0.65
RAB40CQ96S21 CPSF4-206ENST00000441580 942 ntTSL 2 BASIC10.96□□□□□ -0.65
RAB40CQ96S21 CSF2RBP1-201ENST00000447905 391 ntBASIC10.96□□□□□ -0.65
RAB40CQ96S21 AC022210.1-201ENST00000449856 793 ntBASIC10.96□□□□□ -0.65
RAB40CQ96S21 RPL18P13-201ENST00000478088 569 ntBASIC10.96□□□□□ -0.65
RAB40CQ96S21 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC10.96□□□□□ -0.65
RAB40CQ96S21 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC10.96□□□□□ -0.65
RAB40CQ96S21 HLA-J-204ENST00000495278 958 ntBASIC10.96□□□□□ -0.65
RAB40CQ96S21 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC10.96□□□□□ -0.65
RAB40CQ96S21 AC116345.2-201ENST00000512837 523 ntBASIC10.96□□□□□ -0.65
RAB40CQ96S21 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC10.96□□□□□ -0.65
RAB40CQ96S21 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC10.96□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms