Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 KCTD21-AS1-207ENST00000600795 1549 ntBASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 TOX2-203ENST00000372999 2519 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 SLC13A2-201ENST00000314669 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 RSPO2-201ENST00000276659 3111 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CLDN22Q8N7P3 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
CLDN22Q8N7P3 BTBD3-204ENST00000405977 5137 ntAPPRIS P4 TSL 5 BASIC12.3□□□□□ -0.44
CLDN22Q8N7P3 AL132642.2-201ENST00000623423 1998 ntBASIC12.3□□□□□ -0.44
CLDN22Q8N7P3 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CLDN22Q8N7P3 ADAM32-206ENST00000519315 2168 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CLDN22Q8N7P3 PSME3-217ENST00000622892 3183 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CLDN22Q8N7P3 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CLDN22Q8N7P3 ARFIP2-210ENST00000614314 3846 ntTSL 2 BASIC12.3□□□□□ -0.44
CLDN22Q8N7P3 AL359510.2-201ENST00000624958 2249 ntBASIC12.3□□□□□ -0.44
CLDN22Q8N7P3 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CLDN22Q8N7P3 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC12.3□□□□□ -0.44
CLDN22Q8N7P3 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
CLDN22Q8N7P3 MISP-201ENST00000215582 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CLDN22Q8N7P3 DMBX1-201ENST00000360032 2880 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CLDN22Q8N7P3 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
CLDN22Q8N7P3 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CLDN22Q8N7P3 SYK-204ENST00000375754 5005 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
CLDN22Q8N7P3 PTCD2-207ENST00000503868 1653 ntTSL 2 BASIC12.3□□□□□ -0.44
CLDN22Q8N7P3 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CLDN22Q8N7P3 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CLDN22Q8N7P3 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CLDN22Q8N7P3 TPI1P3-201ENST00000335020 740 ntBASIC12.3□□□□□ -0.44
CLDN22Q8N7P3 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
CLDN22Q8N7P3 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CLDN22Q8N7P3 CLIC1-209ENST00000395892 1197 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
CLDN22Q8N7P3 RPL3P2-204ENST00000413027 1203 ntBASIC12.3□□□□□ -0.44
CLDN22Q8N7P3 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC12.3□□□□□ -0.44
CLDN22Q8N7P3 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC12.3□□□□□ -0.44
CLDN22Q8N7P3 AC008723.1-201ENST00000506922 207 ntBASIC12.3□□□□□ -0.44
CLDN22Q8N7P3 AC024681.1-201ENST00000521917 487 ntBASIC12.3□□□□□ -0.44
CLDN22Q8N7P3 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
CLDN22Q8N7P3 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC12.3□□□□□ -0.44
CLDN22Q8N7P3 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CLDN22Q8N7P3 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CLDN22Q8N7P3 MRPS9-201ENST00000258455 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CLDN22Q8N7P3 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CLDN22Q8N7P3 KIAA1958-202ENST00000374244 2643 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
CLDN22Q8N7P3 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CLDN22Q8N7P3 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC12.3□□□□□ -0.44
CLDN22Q8N7P3 CASS4-202ENST00000434344 2888 ntTSL 2 BASIC12.3□□□□□ -0.44
CLDN22Q8N7P3 PTN-202ENST00000393083 1599 ntTSL 5 BASIC12.3□□□□□ -0.44
CLDN22Q8N7P3 TTN-AS1-209ENST00000456053 2033 ntTSL 2 BASIC12.3□□□□□ -0.44
CLDN22Q8N7P3 LINC01744-201ENST00000457698 2042 ntTSL 2 BASIC12.3□□□□□ -0.44
CLDN22Q8N7P3 HMBOX1-203ENST00000397358 4082 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CLDN22Q8N7P3 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC12.3□□□□□ -0.44
CLDN22Q8N7P3 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CLDN22Q8N7P3 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CLDN22Q8N7P3 GPR55-205ENST00000622008 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CLDN22Q8N7P3 TMEM30A-203ENST00000475111 2791 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CLDN22Q8N7P3 TRPV1-201ENST00000310522 2340 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 PRAMEF25-201ENST00000614839 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 PRAMEF26-201ENST00000624207 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 IFT122-204ENST00000349441 3569 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 BORA-202ENST00000377815 1673 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 CIZ1-205ENST00000372948 2858 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 GNB5-203ENST00000396335 2678 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 DQX1-202ENST00000404568 2689 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 TRPC6-201ENST00000344327 4612 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 PLOD3-201ENST00000223127 2920 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 EPS15L1-201ENST00000248070 2924 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 LDLR-203ENST00000535915 2768 ntTSL 2 BASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 AC005077.2-201ENST00000449786 690 ntBASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 AC007326.1-201ENST00000604539 458 ntBASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 AC012073.1-201ENST00000606114 1108 ntBASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 AC244093.1-201ENST00000610837 814 ntBASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 AF254983.2-201ENST00000612331 135 ntBASIC12.29□□□□□ -0.44
CLDN22Q8N7P3 AC010503.4-201ENST00000615487 688 ntBASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms